DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab26

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_038941050.1 Gene:Rab26 / 171111 RGDID:620890 Length:328 Species:Rattus norvegicus


Alignment Length:239 Identity:61/239 - (25%)
Similarity:94/239 - (39%) Gaps:74/239 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRV-TVGMDRRECSVEFADWRMGRMLQVWDTSD 67
            ||..||::::|||||||||||:||.|..|.....: |||:|.|...::....::  .||:|||:.
  Rat    61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKV--KLQIWDTAG 123

  Fly    68 DERFKLLKATQCRSAHGILLVYDITSS---------KSFQNIDGWMKEIRRLCPDKVTVLLVGNK 123
            .|||:.:.....|.|||:..:..::|:         :..:...|.:.....:||.......||.:
  Rat   124 QERFRSVTHAYYRDAHGVSSLLSVSSTVAALRHHQQRFLRQHPGLVDRNPGICPAGRGAHAVGEQ 188

  Fly   124 -----SDDPN--HR--------------QVSMAQ------------------------------- 136
                 ...|:  ||              ||...|                               
  Rat   189 GGNLGQSSPSWPHRACHGLALTKSLCLGQVDSTQERVVKREDGEKLAKVSQNREGEEGLLEIVTL 253

  Fly   137 ----------GFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170
                      |.:|.....:.|.|.|||||.||...|:::|.::
  Rat   254 GPPPYAQHLAGSSYLQEYGLPFMETSAKSGLNVDLAFTAIAKEL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 58/230 (25%)
Rab26XP_038941050.1 P-loop containing Nucleoside Triphosphate Hydrolases 65..326 CDD:476819 59/235 (25%)

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