DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43347 and CG3281

DIOPT Version :9

Sequence 1:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:508 Identity:119/508 - (23%)
Similarity:173/508 - (34%) Gaps:165/508 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   931 SHQSCRECSIAHDHKLCPLRNACGNVTDAVDLGE-----WIERRNLEALAKLK---AD------- 980
            |.|:||.|...|:..|        .|.|.:...:     |   :.|||::|||   .|       
  Fly    11 SSQTCRVCLETHETNL--------YVHDEIKYNDLKLELW---QLLEAVSKLKWTWTDPNLPMHL 64

  Fly   981 AQRQAKRASG--------RQRHE---------------DD---DMEDMEDMDMDMDESSQLSELE 1019
            .|..|:|..|        ...||               |:   |:.::.|.|   |..|....|.
  Fly    65 CQNCARRLIGAYEFIVEVENAHETLQNLFEQQEVAAKPDEVHVDVVELIDQD---DVVSMAQYLS 126

  Fly  1020 TKPLITFAEASVPAEFELHNVEPNVTGVFARTEVRAFTK-LGPLIGQPVQTGEVREGSDMKWIFE 1083
            |    :|||..|..|.:           :...:..|||. :|.   :|:...|.|:         
  Fly   127 T----SFAEQHVEMEEK-----------YGDQDCSAFTSDVGE---EPLYASEDRD--------- 164

  Fly  1084 MCEAGADKSYLLCCDNPNASNWLRFVRPAPSYEERNVNLVSIDRQAYFVSCRDLRNGMELLYWSD 1148
                          |.|..|..|   :|.|...|..    .:.|.:...|  .|.:....:|...
  Fly   165 --------------DEPEDSFQL---KPRPDEIENR----ELSRPSQLGS--RLNHSANFIYKCA 206

  Fly  1149 DCNTMWRK-----KH----------------------TEKTNCGGCNLKFEHPLYYRTHCSVFHD 1186
            .|..::.|     :|                      |....|..|...|:.....|.|...||.
  Fly   207 VCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCEHCPRTFKRQDTLRRHMQAFHP 271

  Fly  1187 PSMSLTIRKYHCKVCGEPVLGKDN-IMKHAAEKHDGKGAYQCQFCSKFFLRLNYLEMHRTYGCAS 1250
            .:::|           ||....|| ..|..|::.|      |..|...| .::.|.:|.......
  Fly   272 DAIAL-----------EPEETTDNSARKRIAKRRD------CPHCGLSF-PVSSLTIHIRRHTGD 318

  Fly  1251 NPNRSRPVCDFCGRKFCQPQKLKAHIKRMHSDMAEVLRDFQCKLCSKLLGSRAALQRHSKEVHSR 1315
            ||.:    ||.|.:.|.:.|.|..|: |.|:..    |..:||:|||...|:..|.||.: :|: 
  Fly   319 NPYK----CDQCEKAFPRSQDLSLHM-RQHTGE----RPSECKICSKKFISQNKLARHMR-LHT- 372

  Fly  1316 NSTVVSCPRCQKLFQNRSNLKIHMLTHSGVRPFKCAEPECNAAFTTKQCLQFH 1368
            .....||..|.|.|...::|||||..|:|.||::|.  .|..:|.....|..|
  Fly   373 GQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCG--VCGESFVCGSHLNIH 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 18/70 (26%)
C2H2 Zn finger 1198..1219 CDD:275368 6/21 (29%)
C2H2 Zn finger 1227..1255 CDD:275368 7/27 (26%)
C2H2 Zn finger 1259..1280 CDD:275368 8/20 (40%)
C2H2 Zn finger 1292..1313 CDD:275368 9/20 (45%)
C2H2 Zn finger 1322..1342 CDD:275368 9/19 (47%)
zf-H2C2_2 1334..1361 CDD:290200 12/26 (46%)
C2H2 Zn finger 1350..1373 CDD:275368 5/19 (26%)
CG3281NP_650132.1 zf-AD 14..92 CDD:285071 21/88 (24%)
C2H2 Zn finger 205..226 CDD:275368 3/20 (15%)
C2H2 Zn finger 249..266 CDD:275368 4/16 (25%)
COG5048 <294..>391 CDD:227381 33/114 (29%)
C2H2 Zn finger 296..315 CDD:275368 5/19 (26%)
zf-H2C2_2 307..330 CDD:290200 7/26 (27%)
C2H2 Zn finger 323..343 CDD:275368 8/20 (40%)
zf-H2C2_2 335..358 CDD:290200 10/27 (37%)
C2H2 Zn finger 351..371 CDD:275368 9/20 (45%)
zf-H2C2_2 364..388 CDD:290200 9/25 (36%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
zf-H2C2_2 391..416 CDD:290200 12/26 (46%)
C2H2 Zn finger 407..424 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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