DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43347 and CG6791

DIOPT Version :9

Sequence 1:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster
Sequence 2:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster


Alignment Length:1060 Identity:185/1060 - (17%)
Similarity:311/1060 - (29%) Gaps:427/1060 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   735 EAKAATAALKAS----------AAAAAAAAASSALPEVLDCRIAEK-IKSELEANSKESLPNALC 788
            ||::..|.|:.|          ....|...:..|:.::||....|: .:.:.|.||||       
  Fly    19 EAESGVAELEDSEQYGNGNDDFLGDTAILDSGDAIDDLLDAEEDEREEEDDYEKNSKE------- 76

  Fly   789 LKKAAAAAAAAAAAAAAVAAAANGSEEEDEDED--------------QPPHPHLLP-------VL 832
                                    .::.|.|:|              :|..|.|.|       |.
  Fly    77 ------------------------PKQPDPDDDALFDFNMEPIVDIAEPQRPSLAPAGPMSQQVR 117

  Fly   833 PPADAVDGITASNGQAGNFHVRSKSQGSKKSQAAKAAAAAMMPPNSYDEHDDEPGAGL------- 890
            ||                  ::..|......:....:..::.|..|.....||.|..:       
  Fly   118 PP------------------MQRHSFPGAGGRPRLGSGLSVRPTTSQINATDENGVPINYELGVV 164

  Fly   891 ------GGNDEDDDDDEELDEEALAREMKMEQNFVEEEDE-HDIAF----RSHQSCRECS--IA- 941
                  ||.....|            ..|...|.:.:.:. ..:.|    :.:|.||||:  || 
  Fly   165 YICPACGGEFRQQD------------HWKRHMNHIHKYNTLRGLNFTPLDKLYQRCRECNKRIAM 217

  Fly   942 HD------HKLCPLRNACGNVTDAVDLGEWIERRNL----------EALAKLKADAQRQAKRASG 990
            |.      ||...|...|...  .:...|:..|::|          |.:|.:     |:...|:|
  Fly   218 HSRENLLKHKFTHLPFRCTKC--YICKREYKYRQDLMVHLRMVHCDEVVAMM-----REGYNAAG 275

  Fly   991 RQR----------------HEDDDMEDMED--------MDMDMDESSQLSELETKPLITFAEASV 1031
            |:.                .|:||:.:..|        ::.|.|||....:              
  Fly   276 RKTRVRESRTEQLLREKSFRENDDLGEESDRIEVRNELLEPDADESGTQEQ-------------- 326

  Fly  1032 PAEFELHNVEPNVTGVFARTEVRAFTKLGPLIGQPVQTGEVREGSDMKWIFEMCEAGADKSYLLC 1096
                   .|...|:...|.|...|                           |:||   |..:.:|
  Fly   327 -------TVSEEVSKKKAGTRGAA---------------------------ELCE---DYIHYMC 354

  Fly  1097 ------CDNPNASNWLRFVRPAPSY-EERNVNLVSIDRQAYFVSCRDL--RNGMELLYWSDDCNT 1152
                  ||  ..:.|.:.:.....| ..|.:|..|:|.|...:.|:.:  .|.::.|        
  Fly   355 PDCGTDCD--THAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKKIVTPNTIKSL-------- 409

  Fly  1153 MWRKKHTEKTNCGGCNLKFEH---PLYYRTHCSVFHDPSMSLTIRKYHCKVCGEPVLGKDNIMKH 1214
               :.|           ||.|   |.:.|                   ||:|.:.......|::|
  Fly   410 ---RAH-----------KFSHLSQPEWLR-------------------CKLCYKGYTDHQEIIRH 441

  Fly  1215 AAEKH--------------------------------DGKGAYQCQFCSKFFLRLNYLEMHRTYG 1247
            ..::|                                :|.|| .....|.:|     .:..|..|
  Fly   442 LLQQHHMDTLMSEDAEEEDGDAPSAIEDECDGDNGNGEGNGA-PLDEDSPYF-----EDAPRRGG 500

  Fly  1248 CASNPNRSRP----VCDFCGRKFCQPQKLKAHIKRMHS--DMAEV------LRDFQCKLCSKLLG 1300
            ..|:.:...|    :|..||::|.:.:..:.|:...||  |::::      .|..:|..|.|::.
  Fly   501 RISSDDIFEPHIDYLCPQCGKEFIEKKHWRTHVVMAHSMNDLSKLNFEMINERQLKCTECDKIIT 565

  Fly  1301 SRAALQ--RHSKEVHSRNSTVVSCPRCQKLFQNRSNLKIHMLTHSGVRPFKCAEPECNAAFTT-- 1361
            :...:|  :..:..|........|.:|.|.:.:|..|..|:.||..|...:.....|.|...|  
  Fly   566 NAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATHHRVGWPRKLSGGCPAPILTPA 630

  Fly  1362 ----KQCLQFHYKKVHNYTQEQMPKIERSVAYTFDAYSGGMKV--DFLGKQTATATPASAASAQA 1420
                ||.:     .|.|.|.|        :.|..|...|||:.  ||..:..|.......|....
  Fly   631 KQPRKQIV-----TVANETYE--------IIYLDDVDQGGMEEDNDFGEQMQAEEDEYPIAPPPP 682

  Fly  1421 QPRPNAAVVSPSSFTEQAPRRRRKSLEDQSSMLSGSLQSDAEFSDDNLFEAIKKSGKSIKDLCRN 1485
            .|.|      |...|.|...:|.|.:.                                   |  
  Fly   683 SPPP------PPQPTTQGNHQRYKCVH-----------------------------------C-- 704

  Fly  1486 EPNLSLLSSKISSIFGDKVPSATASLSASVSAVASSGARKR------KRKKEPV-------VPAQ 1537
                                   .:|.|:.:||....:.||      :|:::||       ||..
  Fly   705 -----------------------GTLFATQAAVRVHISEKRCRKTVVRRRRQPVMSSADPSVPTV 746

  Fly  1538 QQLHLHQQQQ---QQQQQQQQSQH-QQQHQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLH 1598
            :|.::.....   :.:.|.:..:| .:.|.....|.|..:||.:...|..|.:....:.:.:.| 
  Fly   747 EQNYIFLCPSCGFEYKTQFEWRRHINEVHNFDKRQYLNMRQLDKYRYQCTQCKDIVCNSKLKGL- 810

  Fly  1599 HDPQQQHPQYHPHQLHAHAL 1618
               |..|.::.|::|:...|
  Fly   811 ---QDHHFRHLPYRLYLKCL 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 19/105 (18%)
C2H2 Zn finger 1198..1219 CDD:275368 5/20 (25%)
C2H2 Zn finger 1227..1255 CDD:275368 5/27 (19%)
C2H2 Zn finger 1259..1280 CDD:275368 5/20 (25%)
C2H2 Zn finger 1292..1313 CDD:275368 4/22 (18%)
C2H2 Zn finger 1322..1342 CDD:275368 6/19 (32%)
zf-H2C2_2 1334..1361 CDD:290200 7/26 (27%)
C2H2 Zn finger 1350..1373 CDD:275368 5/28 (18%)
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368 5/32 (16%)
C2H2 Zn finger 208..230 CDD:275368 9/21 (43%)
C2H2 Zn finger 235..256 CDD:275368 4/22 (18%)
C2H2 Zn finger 516..532 CDD:275368 4/15 (27%)
C2H2 Zn finger 557..580 CDD:275368 4/22 (18%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
COG5236 <939..>1096 CDD:227561
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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