DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43347 and CG10543

DIOPT Version :9

Sequence 1:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster
Sequence 2:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster


Alignment Length:2018 Identity:403/2018 - (19%)
Similarity:574/2018 - (28%) Gaps:874/2018 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 NNNNNGANSVNSNANNNNYGHSSSSSQSSMDEEEEDDEEEDEEEEEEQDVSQQQQQQQQLAAEQQ 258
            |:|::....|.....||.:     .:.||:..:||..:..|.....|.  ||...:......|..
  Fly   205 NSNSSDGKMVKRKRTNNMH-----LTVSSVRRKEEHGQLGDGYVFHED--SQYTMRYHHSTGEFS 262

  Fly   259 QRA--AAAAAVVAAAVSALHNGNKQQHYNN-NNNNNNNGNTKS----RDRADHHLQSQQQQ---- 312
            :||  |...|::..|:|..|....:|.|.| ..|....|.|.|    ::..:..|:..::|    
  Fly   263 ERAFKAQFRALLRLALSQHHKPFLRQFYENFVVNGRLLGTTPSMRVLKELREQRLEEWRRQRERR 327

  Fly   313 ------EHDDDEDDDEEEGEEDEDEDDEEQHQEQQQQHQGNGHDLTPTDLRHVMPASNNLQQQHT 371
                  |..:.:.|:|.:.:::..|:.||..|||:||.|                ...::||||.
  Fly   328 QLVILMEQSETQRDEEFQQQQELVENQEEVQQEQEQQQQ----------------QLEDIQQQHL 376

  Fly   372 Q----QQQEPAAYDDEGEEEDEDDDDEDEVASSHLDSRATLSSGHLNSAAAAESSGLHMSVAAAA 432
            :    |||.||....:.|.|.|.:......|...:.....:..|                     
  Fly   377 EEIQRQQQLPAISFGDSELESETESQLSSAAQEIMKFEEFIDEG--------------------- 420

  Fly   433 AAAAAAAAAVSAAKLNAQLEQQQSANALDMASGSSATPIAPPPPSSLLGGNSNTSFSTNNNSNHA 497
                     |.|.:|...||.:...:  ||.:|:.                     |.|:.|.| 
  Fly   421 ---------VGAGRLIDGLEMEPEID--DMLAGAG---------------------SMNSASGH- 452

  Fly   498 LSSTHGSLGPGGQGTNCSNDLMATGGGNSRGGSSLSLGINSSSAAALQHQHQQQQQQQQHGGGSG 562
             ||...|.|.|             ..||..|.|.:.|..||      .|.|..          |.
  Fly   453 -SSNSSSSGSG-------------SAGNGNGISGVILENNS------HHTHHL----------SS 487

  Fly   563 GSSAASERRKYRHQNYSKNIYIGTKNAEKWEHMRTRLQFKNDVEFVAYLLNLADNDTDRLNNLPP 627
            .|||                                              ||.            
  Fly   488 SSSA----------------------------------------------NLV------------ 494

  Fly   628 PSPANTPTKGFDGNFKLEPNLSAKDFATPAESSINGNGSGNTSGNGNGDSASAA-SIPMVTPTPP 691
                                             |||..|.|:..|.|.:|.:.: ..|.:||   
  Fly   495 ---------------------------------INGLTSSNSISNNNNNSNNVSLHRPQLTP--- 523

  Fly   692 QRKRYKKRVQFTSETLNGFAGKTKGSGSGGAGAGFSYAKSKKQEAKAATAALKASAAAAAAAAAS 756
                                                                             
  Fly   524 ----------------------------------------------------------------- 523

  Fly   757 SALPEVLDCRIAEKIKSELEANSKESLPNALCLKKAAAAAAAAAAAAAAVAAAANGSEEEDEDED 821
                         :.:::|.|:.|                                         
  Fly   524 -------------QAQNQLAASMK----------------------------------------- 534

  Fly   822 QPPHPHLLPVLPPADAVDGITASNGQAGNFHVRSKSQGSKKSQAAKAAAAAMMPPNSYDEHDDEP 886
              |..| :|:..|.:.:|   ...|||.:....:..||...|.|:: ......|.||    .:.|
  Fly   535 --PSDH-IPISMPMENMD---LKAGQAAHGTANAIMQGGSSSLASQ-LHQQQKPYNS----SNNP 588

  Fly   887 GAGLGGNDEDDDDDEELDEEALAREMKMEQNFVEEEDEHDIAFRSHQSCRECSIAHDHKLCPLRN 951
            .:.:||                         .::::.:..:|...||  |:..:..:.  .|...
  Fly   589 LSMMGG-------------------------MMQQQQQQHVAMPHHQ--RQMMMMPED--FPQHG 624

  Fly   952 ACGNVTDAVDLGEWIERRNLEALAKLK--ADAQRQAKRASGRQRHEDDDM---EDMEDMDMDMDE 1011
            |           ..:..|.:.|||.|.  .|....:.:.:.....:|:|:   ||.:|:|.|:||
  Fly   625 A-----------SMMNSRQMPALAALSNLGDTPAMSGQLNSSLELDDNDLSADEDDDDLDHDLDE 678

  Fly  1012 ----SSQLSELETKPLITFAEASVPAEFELHNVEPNVTGVFARTEVRAFTKLGPLIGQPVQTGEV 1072
                ..||.:                           .|..:.|.::|         .|.|.|..
  Fly   679 LDAAKQQLID---------------------------GGSSSSTSLQA---------PPSQHGSG 707

  Fly  1073 REGSDMKWIFEMCEAGADK---SY--LLCCDNPNASNWLRFVRPAPSYEERNVNLVSIDRQAYFV 1132
            ..||..:      ..|:.|   ||  |||               ..||.:|...|........: 
  Fly   708 SGGSGGQ------TPGSKKDKPSYNCLLC---------------PKSYRKRKSLLDHYKMHPGY- 750

  Fly  1133 SCRDL--RNG---------------MELLYWSDDCNTMWRKK-----HTEKTN--------CGGC 1167
             |.|.  |||               .|..:..:.|...:.:|     |.|..|        ||.|
  Fly   751 -CHDCGQRNGNTLEEIIHHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEIKTFPCGEC 814

  Fly  1168 NLKFEHPLYYRTHCSVFHDPSMSLTIRKYHCKVCGEPVLGKDNIMKHAAEKHDGKGAYQCQFC-S 1231
            .|||......:......|....::      |:||||....|:.:.:|....|.....::|..| :
  Fly   815 GLKFPQKKLQQHFEETGHKADGAI------CEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHN 873

  Fly  1232 KFFLRLNYLEMHRTYGCASNPNRSRP-VCDFCGRKFCQPQKLKAHIKRMHSDMAEVLRDFQCKLC 1295
            :|.|:.| ||.|    ...:....|| |||.||..:.....||.|....|.|::|.    :|.||
  Fly   874 RFTLKAN-LERH----VQLHTEIKRPYVCDLCGSSYFTYPALKEHYSNAHVDVSEC----KCTLC 929

  Fly  1296 SKLLGSRAALQRHSKEVHSRNSTVVSCPRCQKLFQNRSNLKIHMLTHSGVRPFKCAEPECNAAFT 1360
            .|..||..:|||                              |:.:||..||..|  ..|:..|.
  Fly   930 GKRFGSAKSLQR------------------------------HLPSHSEERPHCC--NYCDQTFK 962

  Fly  1361 TKQCLQFHYKKVHNYT-------QEQMPKIERSVAYTFDAYSGGMKVDFLGK--------QTATA 1410
            .|..|..|.:.:|...       :::.||.......:.....|...|....|        |.|.|
  Fly   963 WKTHLVRHKQTMHGNEPPPPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQAAAA 1027

  Fly  1411 TPASAASAQAQPRPNAAVVSPSSFTEQAPRRRRKSLEDQSSMLSGSLQSDAEFSDDNLFEAIKKS 1475
            ..|:|:|.|.|.:.:||..:|.......|               |.||.|.       |.|...|
  Fly  1028 AAAAASSQQQQQKGSAATPTPPPPVSTTP---------------GCLQQDP-------FNAAMVS 1070

  Fly  1476 GKSIKD--LCRNEPNLSLLSSKISSIFGDKVPSATASLSASVSAVASSGARKRKRKKEPVVPAQQ 1538
            ..|.:.  ...::.::|...|:.:||:..       |.:|..........:....::.|..|..|
  Fly  1071 SNSSQSSTASTSQHSVSTSESQQNSIYNQ-------SFNAEKQQPGQQQPQNTLHQQHPTPPPPQ 1128

  Fly  1539 Q--------------------LHLH-----------------------------QQQQQQQQQQQ 1554
            |                    |||.                             |.|||||||||
  Fly  1129 QQQQQQQQQQALPQSRVGPGELHLQRMNSFGQDGQFHFESNPAAGAYQQHQLISQYQQQQQQQQQ 1193

  Fly  1555 QSQHQQQHQQQH---AQQLQH--------------QQLQQQHAQQHQQQQHH---LHQQHQ---- 1595
            |.|.|.|.||||   .||.||              .|||||..|||....||   :|.|||    
  Fly  1194 QQQQQPQQQQQHHLAQQQQQHMRSHTPQSPHPPHPSQLQQQQPQQHFSSPHHMPPMHHQHQLMMQ 1258

  Fly  1596 ---------QLHHDP-----QQQH--PQYHPHQLHA-----HALPHQQQQQQQQQQQQQQQL--- 1636
                     .|||.|     ||||  |.:.|...||     ...|.|||||||||||||||.   
  Fly  1259 QQHRHNQRSPLHHHPAAQQLQQQHQQPSHSPQHQHARLQSPQPAPVQQQQQQQQQQQQQQQQFLQ 1323

  Fly  1637 -----------HGDPDDEE-----------VENARL----------------------EQVRRKQ 1657
                       .|:|.:.:           ||:|..                      :|.:::|
  Fly  1324 QQAADTWGNMNFGNPPNNQQVELKDNKFYIVESAEFLGLPMNVPPSPQQQQQQAVSKPQQQQQQQ 1388

  Fly  1658 NAQ------------LSL-----VESFLTTTAQRLSAQQQVQQVVAAAAAVSAMAGAGE------ 1699
            :.|            :|.     ...|..|:.|:...|||.||.........:.|.:.:      
  Fly  1389 HPQPQQPDPTLAGDLMSFQHMWPAPGFSQTSQQQQPQQQQQQQAAQQQQQAQSQANSSDPHNYNN 1453

  Fly  1700 -----------DPAKLGHMMGHMGVGVGVGMDEEEDDDEDDDD-----------GGG----GGGG 1738
                       :||.:.:....|.........:::...:....           |.|    |||.
  Fly  1454 IGSILTNLIDTNPAPMEYNFDLMQQQQTPSAQQQQQQQQQQQAAQQQHHSAGAYGSGLMRSGGGV 1518

  Fly  1739 GGGSAVQH------------------HPH-VHAHQAHHSHVHAHAHPHHAHSHAHPHQHPASQGA 1784
            .||:..||                  ||| :.|.|....|.|.|..|..|     ||.:      
  Fly  1519 YGGAYEQHLSDQLVSEQQKQNSFQPYHPHGLQAQQQQPLHPHPHLLPPPA-----PHNN------ 1572

  Fly  1785 GQQDYRHAAAMNAALGQNLVVSKGSKKWIQEVQDSSDVG-----GEGAGGGGGGP--GDSG---- 1838
                                           |.|.:.||     |.|.|.|.|.|  ||..    
  Fly  1573 -------------------------------VYDRTGVGVGVGVGVGVGVGVGYPMLGDDTKSVL 1606

  Fly  1839 GPGGGGACGQLAGGSGPGPDLGFAVPPTAVDEHSKLLGQNRDFLARLMSSASASHAHAHAHAHAH 1903
            .|..||...|:. ..|..|||.:.  |...|..||                  .|..|....|.|
  Fly  1607 PPMMGGMMQQMP-PHGQQPDLIYY--PVKNDXQSK------------------QHQQAQQPNHLH 1650

  Fly  1904 AHQ 1906
            .|:
  Fly  1651 HHR 1653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 23/71 (32%)
C2H2 Zn finger 1198..1219 CDD:275368 7/20 (35%)
C2H2 Zn finger 1227..1255 CDD:275368 8/28 (29%)
C2H2 Zn finger 1259..1280 CDD:275368 7/20 (35%)
C2H2 Zn finger 1292..1313 CDD:275368 9/20 (45%)
C2H2 Zn finger 1322..1342 CDD:275368 1/19 (5%)
zf-H2C2_2 1334..1361 CDD:290200 8/26 (31%)
C2H2 Zn finger 1350..1373 CDD:275368 6/22 (27%)
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 7/34 (21%)
C2H2 Zn finger 751..773 CDD:275368 5/21 (24%)
C2H2 Zn finger 781..801 CDD:275368 4/19 (21%)
PHA00733 <804..860 CDD:177301 14/61 (23%)
C2H2 Zn finger 811..827 CDD:275368 6/15 (40%)
C2H2 Zn finger 839..860 CDD:275368 7/20 (35%)
C2H2 Zn finger 868..888 CDD:275368 8/24 (33%)
C2H2 Zn finger 897..913 CDD:275368 6/15 (40%)
C2H2 Zn finger 926..946 CDD:275368 10/49 (20%)
C2H2 Zn finger 954..975 CDD:275368 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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