DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43347 and CG1529

DIOPT Version :9

Sequence 1:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster
Sequence 2:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster


Alignment Length:440 Identity:91/440 - (20%)
Similarity:162/440 - (36%) Gaps:127/440 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1227 CQFCSKFFLRLNYLE-----MHRTYGCASNPNRSRP-VCDFCGRKFCQPQKLKAHIKRMHSDMAE 1285
            |..|.|...:|.|||     :|:.|        |:| :|..|.:.|.:.::|::|::..|..:.:
  Fly   171 CDQCGKQVYKLPYLEAHIRSVHQGY--------SKPFLCRSCDKSFTRYEQLRSHMRNAHPQLEQ 227

  Fly  1286 V---LRDFQCKLCSKLLGSRAALQRHSKEVHSRNSTVVSCPRCQKLFQNRSNLKIHMLTHSGV-R 1346
            :   |||..|:||::...::.||..|.|....|...|  |..|......|:.|..|:.||:.. .
  Fly   228 LQQELRDLICELCNRQYSTKNALGEHLKRHAQRKEHV--CEHCGVAKVTRTELLTHLRTHNPTWE 290

  Fly  1347 PFKCAEPECNAAFTTKQCLQFHYKKVHNYTQE-QMPKIERSVAYTFDAYSGGMKVDFLGKQTATA 1410
            .|||  .:|...|..|..:..|.:.||...:. |....|:.    |..::..::.:.|      .
  Fly   291 RFKC--EQCPQLFRHKSAISRHVRVVHEGQRRFQCGHCEKK----FGTHASQVRHERL------H 343

  Fly  1411 TPASAASAQAQPRPNAAVVSPSSFTEQAPRRRRKSLEDQSSMLSGSLQSDAEFSDDNLFEAIKKS 1475
            |.::.:...|:..|.|.:..      |.|...|::||                            
  Fly   344 TESTGSGEAAEEWPFACIHC------QKPCVSRQTLE---------------------------- 374

  Fly  1476 GKSIKDLCRNEPNLSLLSSKISSIFGDKVPSATASLSASVSAVASSGARKRKRKKEPVVPAQQQL 1540
                         |.|...:                           |||..||:..        
  Fly   375 -------------LHLRRHR---------------------------ARKTHRKRRE-------- 391

  Fly  1541 HLHQQQQQQQQ----QQQQSQHQQQHQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDP 1601
            |..:.|:|:|:    |:|.::..||.|.:..::|:.:.|.:      :..::.:..|..|..::.
  Fly   392 HSRESQEQEQEHDRDQEQGAREAQQDQLRKGEKLRQRDLSR------ESHRNEVTMQTSQRPNEC 450

  Fly  1602 QQQHPQYHPHQLHAHALPHQQQQQQQQQQQQQQQLHGDPDDEEVENARLE 1651
            ||....|.|......|...:.:|:.....:.|.::  :.|.|..::||||
  Fly   451 QQGQESYDPEPDPLEASQCKLEQEDALDPEWQHKI--EQDAESQDSARLE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 14/46 (30%)
C2H2 Zn finger 1198..1219 CDD:275368
C2H2 Zn finger 1227..1255 CDD:275368 9/32 (28%)
C2H2 Zn finger 1259..1280 CDD:275368 5/20 (25%)
C2H2 Zn finger 1292..1313 CDD:275368 7/20 (35%)
C2H2 Zn finger 1322..1342 CDD:275368 5/19 (26%)
zf-H2C2_2 1334..1361 CDD:290200 9/27 (33%)
C2H2 Zn finger 1350..1373 CDD:275368 5/22 (23%)
CG1529NP_001138223.2 zf-AD 11..79 CDD:285071
C2H2 Zn finger 171..192 CDD:275368 7/20 (35%)
zf-C2H2_2 201..>257 CDD:289522 16/55 (29%)
C2H2 Zn finger 201..222 CDD:275368 5/20 (25%)
C2H2 Zn finger 237..257 CDD:275368 7/19 (37%)
C2H2 Zn finger 265..285 CDD:275368 5/19 (26%)
zf-C2H2_8 268..349 CDD:292531 20/92 (22%)
C2H2 Zn finger 294..315 CDD:275368 5/22 (23%)
C2H2 Zn finger 323..343 CDD:275368 3/29 (10%)
C2H2 Zn finger 360..380 CDD:275368 7/66 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.