DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43347 and CG11398

DIOPT Version :9

Sequence 1:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster
Sequence 2:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster


Alignment Length:330 Identity:69/330 - (20%)
Similarity:116/330 - (35%) Gaps:72/330 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1184 FHDPSMSLTIRKYHCKVCGEPVLGKDNIMKHAAEKHDGKGAYQCQFCSKFFLRLNYLEMHR---T 1245
            :.|..:||...:          |..:.:.:.:..:..|..::.|:.|...||....|..||   .
  Fly    19 YEDEELSLNTEE----------LQFEELNERSQHQQGGSPSFVCRRCPALFLTREELAAHRPTHR 73

  Fly  1246 YGCASNPNRSRPVCDFCGRKFCQPQKLKAHIKRM--HSDMAEVLRDFQCKLCSKLLGSRAALQRH 1308
            |........|...||.|||.|   ||..|.:..|  |:|    :|::.|..|......|:..:.|
  Fly    74 YQGGQQTPASEHACDACGRVF---QKHNALVDHMNAHND----VRNYPCPECPARFVQRSNRECH 131

  Fly  1309 SKEVHSRNSTVVSCPR--CQKLFQNRS-----------------------------NLKIHMLTH 1342
            .|.|| |...:.|||.  |:|.||.|.                             |.:.|:.:|
  Fly   132 LKNVH-RKVYLHSCPEPGCKKRFQQRRECDQHVKTVHQNERNLVCDTCSARFSHPVNYRKHLASH 195

  Fly  1343 SGVRPFKCAEPECNAAFTTKQCLQFHYKKVHNYTQEQMPKI-----ERSVAYTFDAYSGGMKVDF 1402
            ...:.:.|  |.|...|...:....|. .||:..:..:..:     .|.........:.|...|.
  Fly   196 GSAKSYGC--PICGKLFGRPENRDVHL-FVHSICKAYICSVCGADYMRRNQLIRHGLASGHHNDP 257

  Fly  1403 LGKQTATATPASAASAQAQPRPNAAVVSPSSFTEQAPRRRRKSLEDQSSMLSGSLQSDAEFSDDN 1467
            :.:|....:||.||..::|          .|..:::.....:.|:...::.|.....:::||:..
  Fly   258 IVRQKPQFSPALAAKNRSQ----------RSAIDESQDEELQWLKGVDALDSAGYLENSQFSNTG 312

  Fly  1468 LFEAI 1472
            ...||
  Fly   313 KMTAI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 17/72 (24%)
C2H2 Zn finger 1198..1219 CDD:275368 1/20 (5%)
C2H2 Zn finger 1227..1255 CDD:275368 8/30 (27%)
C2H2 Zn finger 1259..1280 CDD:275368 10/22 (45%)
C2H2 Zn finger 1292..1313 CDD:275368 5/20 (25%)
C2H2 Zn finger 1322..1342 CDD:275368 9/50 (18%)
zf-H2C2_2 1334..1361 CDD:290200 7/26 (27%)
C2H2 Zn finger 1350..1373 CDD:275368 5/22 (23%)
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 7/19 (37%)
C2H2 Zn finger 87..107 CDD:275368 10/22 (45%)
C2H2 Zn finger 115..136 CDD:275368 5/20 (25%)
C2H2 Zn finger 144..165 CDD:275368 7/20 (35%)
C2H2 Zn finger 175..195 CDD:275368 2/19 (11%)
C2H2 Zn finger 203..223 CDD:275368 5/22 (23%)
C2H2 Zn finger 231..247 CDD:275368 1/15 (7%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.