DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43347 and LOC108182686

DIOPT Version :9

Sequence 1:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster
Sequence 2:XP_017210033.1 Gene:LOC108182686 / 108182686 -ID:- Length:420 Species:Danio rerio


Alignment Length:288 Identity:70/288 - (24%)
Similarity:104/288 - (36%) Gaps:84/288 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1150 CN---TMWRKKHTEKTN---------------CGGCNLKFEHPLYYRTHCSVFHDPSMSLTIRKY 1196
            ||   ...||..::|:|               |..|...|.....::.|..: |...     ||:
Zfish    80 CNFSCKQCRKSFSQKSNLDVHMRVHTREQPYTCEQCGKSFGQIQGFKAHMRI-HTGE-----RKF 138

  Fly  1197 HCKVCGEPVLGKDNIMKHAAEKHDGKGAYQCQFCSKFFLRLNYLEMHRTYGCASNPNRSRPVCDF 1261
            .|:.||:......|...| ...|.|:..:.|:.|.|.|.....|::|........|.    .|:.
Zfish   139 TCQECGKSFYHVGNFAAH-MRIHTGEKPFSCEQCGKSFCHKPNLDVHMRVHTGEKPY----TCEQ 198

  Fly  1262 CGRKFCQPQKLKAHIK-------------------------RMHSDMAEVLRDFQCKLCSKLLGS 1301
            ||:.|.|.|....|::                         .|.:...|  |.|.|.||.|....
Zfish   199 CGKSFGQKQSFNTHMRIHTGKRPCTCQQCGKSYYNARSLAAHMRTHTGE--RPFSCILCRKSFSL 261

  Fly  1302 R----AALQRHSKE-------------------VHSRNST---VVSCPRCQKLFQNRSNLKIHML 1340
            :    |.::.|::|                   :|.|..|   ..:|..|.|.|.:.|:||.|:.
Zfish   262 KLTLIAHMRVHTREKPHTCEQCGKSFGQKQDLYIHMRIHTGEKPYTCTECGKSFPHISSLKHHIR 326

  Fly  1341 THSGVRPFKCAEPECNAAFTTKQCLQFH 1368
            ||:|.:||.||  :|..:||||..|:.|
Zfish   327 THTGEKPFACA--QCGKSFTTKTSLKNH 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 18/69 (26%)
C2H2 Zn finger 1198..1219 CDD:275368 5/20 (25%)
C2H2 Zn finger 1227..1255 CDD:275368 7/27 (26%)
C2H2 Zn finger 1259..1280 CDD:275368 7/45 (16%)
C2H2 Zn finger 1292..1313 CDD:275368 7/43 (16%)
C2H2 Zn finger 1322..1342 CDD:275368 8/19 (42%)
zf-H2C2_2 1334..1361 CDD:290200 12/26 (46%)
C2H2 Zn finger 1350..1373 CDD:275368 9/19 (47%)
LOC108182686XP_017210033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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