DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1628 and Slc25a20

DIOPT Version :9

Sequence 1:NP_572639.2 Gene:CG1628 / 31990 FlyBaseID:FBgn0030218 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_065266.1 Gene:Slc25a20 / 57279 MGIID:1928738 Length:301 Species:Mus musculus


Alignment Length:297 Identity:95/297 - (31%)
Similarity:142/297 - (47%) Gaps:26/297 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 DFLAGSLGGAAQVYVSQPLDTVKVKLQTFPEA-------YRGMLDCFLSTYRKDGVLRGLYAGSV 229
            :.|||..||...|:|..|||||||:|||.|.:       |.|.||||..|..::|: .|||.|..
Mouse    13 NLLAGGFGGMCLVFVGHPLDTVKVRLQTQPPSLSGQPPMYSGTLDCFRKTLMREGI-TGLYRGMA 76

  Fly   230 PAVFANVAENSVLFAAYGGCQKFVAFCVGKETAGDLTTVQNACAGSLAACFSTLTLCPTELIKCK 294
            ..:.......:|.|..:|..:|...    |....:|:..|...||.|:..|:|..:.|.|.|||.
Mouse    77 APIIGVTPMFAVCFFGFGLGKKLQQ----KSPEDELSYPQLFTAGMLSGVFTTGIMTPGERIKCL 137

  Fly   295 LQALREMKNFVEPAHPQDIRTPWTL--TRYIWRTEGIRGFYRGLSSTFLREMPGYFFFFGSYEGT 357
            ||.         .|...:.:...||  .:.:::..||||||:|...|.:|::|....:|.:||..
Mouse   138 LQI---------QASSGENKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWL 193

  Fly   358 RELLRRDDQSKDDIGPLRTMIAGAIGGVCLWTSTFPADVIKSRIQVK---NLNESMFAVGADIVR 419
            :.|...:.:|..|:...|.::||...|:..|....|.||:|||.|..   ........|..:::|
Mouse   194 KNLFTPEGKSVSDLSVPRILVAGGFAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIR 258

  Fly   420 REGVLALYRGLLPSVLRTIPATATLFVVYEYTKRALS 456
            .|||.:||:|....::|..||.|..|:.:|...:.|:
Mouse   259 EEGVTSLYKGFNAVMIRAFPANAACFLGFEIAMKFLN 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1628NP_572639.2 PTZ00169 162..455 CDD:240302 94/294 (32%)
Mito_carr 170..252 CDD:278578 33/86 (38%)
Mito_carr 263..364 CDD:278578 31/102 (30%)
Mito_carr 369..455 CDD:278578 27/88 (31%)
Slc25a20NP_065266.1 Mito_carr 6..103 CDD:278578 34/94 (36%)
Solcar 1 8..99 33/86 (38%)
Mito_carr 106..198 CDD:278578 31/100 (31%)
Solcar 2 108..196 30/96 (31%)
Mito_carr 205..294 CDD:278578 27/88 (31%)
Solcar 3 207..293 26/85 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.