DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1628 and GC2

DIOPT Version :9

Sequence 1:NP_572639.2 Gene:CG1628 / 31990 FlyBaseID:FBgn0030218 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster


Alignment Length:314 Identity:84/314 - (26%)
Similarity:130/314 - (41%) Gaps:74/314 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 MHGGGTGNNINFVEGLIDFLAGSLGGAAQVYVSQPLDTVKVKLQ------TFPEAYRGMLDCFLS 213
            ::||        |.|:|        |.|.||   |||.||.:||      .....|..:.|||..
  Fly    25 INGG--------VAGII--------GVACVY---PLDMVKTRLQNQTIGPNGERMYTSIADCFRK 70

  Fly   214 TYRKDGVLRGLYAGSVPAVFANVAENSVLFAAYGGCQKFVAFCVGKETAGDLTTVQNACAGSLAA 278
            |...:|.. |:|.||...:.....|.::...|    ..|..:.:..:. |.:...:...||.||.
  Fly    71 TIASEGYF-GMYRGSAVNIVLITPEKAIKLTA----NDFFRYHLASDD-GVIPLSRATLAGGLAG 129

  Fly   279 CFSTLTLCPTELIKCKLQ-----------ALREMKNFVEPAHPQDIRTPWTLTRYIWRTEGIRGF 332
            .|..:...|.||:|.::|           |.||:|..          |...||:.:.|..||.|.
  Fly   130 LFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTI----------TALGLTKTLLRERGIFGL 184

  Fly   333 YRGLSSTFLREMPGYFFFFG-----SYEGTRELLRRDDQSKDDIGPLRTMIAGAIGGVCLWTSTF 392
            |:|:.:|.:|::.....:|.     :.:|.    |:.|.|.:.:. ..::|||.:.|:   ||.|
  Fly   185 YKGVGATGVRDITFSMVYFPLMAWINDQGP----RKSDGSGEAVF-YWSLIAGLLSGM---TSAF 241

  Fly   393 ---PADVIKSRIQVKNLNESMFAVGADIVRR----EGVLALYRGLLPSVLRTIP 439
               |.||:|:|:|..  .|..|....|.|.|    ||:.|.::|.|..::...|
  Fly   242 MVTPFDVVKTRLQAD--GEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1628NP_572639.2 PTZ00169 162..455 CDD:240302 82/307 (27%)
Mito_carr 170..252 CDD:278578 24/87 (28%)
Mito_carr 263..364 CDD:278578 29/116 (25%)
Mito_carr 369..455 CDD:278578 24/78 (31%)
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 83/308 (27%)
Mito_carr 16..106 CDD:278578 29/104 (28%)
Mito_carr 123..203 CDD:278578 25/89 (28%)
Mito_carr 228..302 CDD:278578 24/71 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441860
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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