DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1628 and GC1

DIOPT Version :10

Sequence 1:NP_572639.2 Gene:CG1628 / 31990 FlyBaseID:FBgn0030218 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster


Alignment Length:315 Identity:78/315 - (24%)
Similarity:118/315 - (37%) Gaps:77/315 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 GSLGGAAQVYVSQPLDTVKVKLQ------TFPEAYRGMLDCFLSTYRKDGVLRGLYAGSVPAVFA 234
            |.:.|...|....|||.||.:||      .....|..|.|||..||:.:|.. |:|.||...:..
  Fly    28 GGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYF-GMYRGSGVNILL 91

  Fly   235 NVAENSVLFAAYGGCQKFVAFCVGKETAGD-----LTT-------VQNACAGSLAACFSTLTLCP 287
            ...|.::                 |.||.|     |||       .....||.||..|..:...|
  Fly    92 ITPEKAI-----------------KLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTP 139

  Fly   288 TELIKCKLQ-------ALREMKNFVEPAHPQDIRTPWTLTRYIWRTEGIRGFYRGLSSTFLREMP 345
            .||:|.::|       |.:.....||..      :...|...:.:.:||.|.|:|:.:|.||::.
  Fly   140 MELLKIQMQDAGRVAAAAKLAGKTVEKV------SATQLASQLIKDKGIFGLYKGIGATGLRDVT 198

  Fly   346 GYFFFFGSYEGTRELLRRDDQSKDDIGPLR-----------TMIAGAIGGVCLWTSTFPADVIKS 399
            ....:|..:           .:.:|:||.|           :.:||...|.....:..|.||:|:
  Fly   199 FSIIYFPLF-----------ATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKT 252

  Fly   400 RIQV--KNLNESMFAVGADIV----RREGVLALYRGLLPSVLRTIPATATLFVVY 448
            |:|.  |...|..|...:|.:    :.||..|.::|.|..::...|.......||
  Fly   253 RLQAIKKADGEKEFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVY 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1628NP_572639.2 Mito_carr 170..252 CDD:395101 23/81 (28%)
Mito_carr 263..364 CDD:395101 27/119 (23%)
Mito_carr 369..456 CDD:395101 25/97 (26%)
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 72/291 (25%)

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