DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1628 and colt

DIOPT Version :9

Sequence 1:NP_572639.2 Gene:CG1628 / 31990 FlyBaseID:FBgn0030218 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:308 Identity:102/308 - (33%)
Similarity:147/308 - (47%) Gaps:56/308 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 FLAGSLGGAAQVYVSQPLDTVKVKLQTFPE-------AYRGMLDCFLSTYRKDGVLRGLYAGSVP 230
            ||.|..||...|....||||:||:|||.|.       .|||..||...|.:.:|| ||||.| :.
  Fly    19 FLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGV-RGLYKG-MS 81

  Fly   231 AVFANVAENSVLFAAYGGCQKFVAFCVGK--ETAGD---LTTVQNACAGSLAACFSTLTLCPTEL 290
            |....||.   :||.   |  |..:.:||  :..|:   ||..|...|||.:..||||.:.|.|.
  Fly    82 APLTGVAP---IFAM---C--FAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGER 138

  Fly   291 IKCKLQAL------REMKNFVEPAHPQDIRTPWTLTRYIWRTEGIRGFYRGLSSTFLREMPGYFF 349
            ||..||..      |:....::.|..            :::..|:|..::|..:|.||::|....
  Fly   139 IKVLLQTQQGQGGERKYNGMIDCAGK------------LYKEGGLRSVFKGSCATMLRDLPANGL 191

  Fly   350 FFGSYEGTRELLRRDDQSKDDIGPL---RTMIAGAIGGVCLWTSTFPADVIKSRIQ------VKN 405
            :|..||..:::.:    ||.:.|.:   .|:.||.:.|:..|....||||:|||:|      .|:
  Fly   192 YFLVYEALQDVAK----SKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKH 252

  Fly   406 LNESMFAVGADIVRREGVLALYRGLLPSVLRTIPATATLFVVYEYTKR 453
            ...|:|   .|::.::|.||||||:.|.:||..||.|..|...|...:
  Fly   253 GIRSVF---KDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANK 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1628NP_572639.2 PTZ00169 162..455 CDD:240302 102/308 (33%)
Mito_carr 170..252 CDD:278578 35/85 (41%)
Mito_carr 263..364 CDD:278578 29/109 (27%)
Mito_carr 369..455 CDD:278578 33/94 (35%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 38/97 (39%)
Mito_carr 112..202 CDD:395101 28/101 (28%)
Mito_carr 210..299 CDD:395101 33/91 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441718
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45624
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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