DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1628 and Slc25a20

DIOPT Version :9

Sequence 1:NP_572639.2 Gene:CG1628 / 31990 FlyBaseID:FBgn0030218 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_446417.2 Gene:Slc25a20 / 117035 RGDID:621443 Length:301 Species:Rattus norvegicus


Alignment Length:303 Identity:96/303 - (31%)
Similarity:143/303 - (47%) Gaps:28/303 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 VEGLIDFLAGSLGGAAQVYVSQPLDTVKVKLQTFPEA-------YRGMLDCFLSTYRKDGVLRGL 224
            :..|.:.|||..||...|:|..|||||||:|||.|.:       |.|.:|||..|..::|: .||
  Rat     8 ISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTIDCFRKTLFREGI-TGL 71

  Fly   225 YAGSVPAVFANVAENSVLFAAYGGCQKFVAFCVGKETAGDLTTVQNACAGSLAACFSTLTLCPTE 289
            |.|....:.......:|.|..:|..::...    |....:||..|...||.|:..|:|..:.|.|
  Rat    72 YRGMAAPIIGVTPMFAVCFFGFGLGKRLQQ----KSPEDELTYPQLFTAGMLSGVFTTGIMTPGE 132

  Fly   290 LIKCKLQALREM-KNFVEPAHPQDIRTPWTL--TRYIWRTEGIRGFYRGLSSTFLREMPGYFFFF 351
            .|||.||..... ||          :...||  .:.:::..||||||:|...|.:|::|....:|
  Rat   133 RIKCLLQIQASSGKN----------KYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYF 187

  Fly   352 GSYEGTRELLRRDDQSKDDIGPLRTMIAGAIGGVCLWTSTFPADVIKSRIQVK---NLNESMFAV 413
            .:||..:.|.....:|..|:...|.::||...|:..|....|.||:|||.|..   ........|
  Rat   188 MTYEWLKNLFTPQGKSVHDLSVPRVLVAGGFAGIFNWVVAIPPDVLKSRFQTAPPGKYPNGFRDV 252

  Fly   414 GADIVRREGVLALYRGLLPSVLRTIPATATLFVVYEYTKRALS 456
            ..:::|.|||.:||:|....::|..||.|..|:.:|...:.|:
  Rat   253 LRELIREEGVTSLYKGFNAVMIRAFPANAACFLGFEIAMKILN 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1628NP_572639.2 PTZ00169 162..455 CDD:240302 95/300 (32%)
Mito_carr 170..252 CDD:278578 33/88 (38%)
Mito_carr 263..364 CDD:278578 33/103 (32%)
Mito_carr 369..455 CDD:278578 27/88 (31%)
Slc25a20NP_446417.2 Mito_carr 6..103 CDD:278578 33/99 (33%)
Solcar 1 8..99 33/91 (36%)
PTZ00169 11..277 CDD:240302 90/280 (32%)
Mito_carr 106..198 CDD:278578 33/101 (33%)
Solcar 2 108..196 32/97 (33%)
Mito_carr 206..294 CDD:278578 27/87 (31%)
Solcar 3 207..293 26/85 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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