DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA2 and C15

DIOPT Version :10

Sequence 1:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens
Sequence 2:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster


Alignment Length:314 Identity:87/314 - (27%)
Similarity:119/314 - (37%) Gaps:92/314 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    14 SQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQT---------IPSLNPGSHPRH-- 67
            |:..|:|.|.|     :..:|||.:....|.|.|:..|||.:         :.|.:|||...:  
  Fly    53 SETPLSESLQS-----EQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNN 112

Human    68 -GAGGRPK---------------PSPAGSR-GSPVPAGALQPPEYPWMKEKKAAKKTALLPAAAA 115
             |..|..|               .|.|.|. ||   |.||.  .||.:....|......:|....
  Fly   113 SGEKGEEKELLQQEDHDLAYKLATSIANSTYGS---AAALY--SYPHLYPSAAGGHVLRVPPQRT 172

Human   116 AATAAATGP---ACLSHKESLEIADGSGGGSRRL---------------RTAYTNTQLLELEKEF 162
            ..|.|.. |   |.|:|:...:....:...:||:               ||::|..|:.||||.|
  Fly   173 PLTWALP-PLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRF 236

Human   163 HFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCKSLEDSEKVEEDE 227
            |..|||....|..:|..|.:|:.|||.||||||.|.:|||                    .||.|
  Fly   237 HKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQT--------------------AEERE 281

Human   228 EEKTLFEQALSVSGALLEREGYTFQQNALSQ----QQAPNGHNGDSQSFPVSPL 277
            .|:    ||.:       |...:.|..|:|:    ..||.|..|.....|::.|
  Fly   282 AER----QAAN-------RLMLSLQAEAISKGFAPPSAPLGSQGGVNGAPLAAL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 21/78 (27%)
Antp-type hexapeptide 94..99 2/4 (50%)
Homeodomain 144..200 CDD:459649 29/70 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279 7/25 (28%)
C15NP_476873.2 COG5576 <196..315 CDD:227863 45/149 (30%)
Homeodomain 218..274 CDD:459649 27/55 (49%)

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