DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA2 and bap

DIOPT Version :10

Sequence 1:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens
Sequence 2:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster


Alignment Length:247 Identity:68/247 - (27%)
Similarity:88/247 - (35%) Gaps:66/247 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    42 LSHSTLIPPPFEQTIPSLNPGSHPRHGAGGRPKP---SPAGSR-----GSP-------------- 84
            ||.|...|......:...||.:.........|:|   .|:..|     .||              
  Fly    16 LSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQ 80

Human    85 ---VPAGALQPPEY-----------------PWMKEKKAA----KKTALLPAAAAA--------- 116
               :...|.||..|                 .......||    :|.|...:..||         
  Fly    81 PKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTS 145

Human   117 --ATAAATGPACLSHKESLEIADGSG-GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAA 178
              :...:..|...|..||....|||| ...:|.|.|:::.|:.|||:.|...:||..|.|.|:|.
  Fly   146 NDSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAK 210

Human   179 LLDLTERQVKVWFQNRRMKHKRQTQCKENQNSE----GKCKSLEDSEKVEED 226
            .|.|||.|||:||||||.|.||    |:.|..|    |..|.:.....|.||
  Fly   211 SLRLTETQVKIWFQNRRYKTKR----KQIQQHEAALLGASKRVPVQVLVRED 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 14/75 (19%)
Antp-type hexapeptide 94..99 1/21 (5%)
Homeodomain 144..200 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 10/33 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279
bapNP_732637.1 Homeodomain 176..232 CDD:459649 28/55 (51%)
Blue background indicates that the domain is not in the aligned region.

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