DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA2 and tin

DIOPT Version :10

Sequence 1:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens
Sequence 2:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster


Alignment Length:271 Identity:62/271 - (22%)
Similarity:93/271 - (34%) Gaps:99/271 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    39 TSTLSHSTLIPPP----------------------------FEQTIPSLN--------------- 60
            |::.|.|.|:|||                            |:.:..:.|               
  Fly   109 TTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHHHGHPHQSFQHSASAYNMSASQFYAGASATAY 173

Human    61 --PGSHPRHGAG-----GRPKPSPAGSRGSPVPAGALQPPEYPWMKEKKAA---------KKTAL 109
              |.::..:.||     |...||..|.:...:|...:.|.  |.:....:|         :|..:
  Fly   174 QTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPS--PTLDLNSSAEVDSLQAPTQKLCV 236

Human   110 LPAAAAAATAAATGPACLS---------HKESLEIAD----------------GSGGGS------ 143
            .|.:......|:...:..|         .|::.::..                ||..||      
  Fly   237 NPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMK 301

Human   144 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR-QTQCKEN 207
            |:.|..::..|:||||..|...|||....|..||..|:|:..|||:||||||.|.|| ...|   
  Fly   302 RKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGDIDC--- 363

Human   208 QNSEGKCKSLE 218
               ||..|.|:
  Fly   364 ---EGIAKHLK 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 16/100 (16%)
Antp-type hexapeptide 94..99 1/4 (25%)
Homeodomain 144..200 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279
tinNP_524433.1 Homeodomain 302..358 CDD:459649 26/55 (47%)
Blue background indicates that the domain is not in the aligned region.

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