DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA2 and ems

DIOPT Version :10

Sequence 1:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens
Sequence 2:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster


Alignment Length:273 Identity:83/273 - (30%)
Similarity:114/273 - (41%) Gaps:73/273 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    26 PPVA---DTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPR----H--GAG-----GRP--- 73
            ||.:   .:.|.||..|..:|.....||..:|..|   |.::|:    |  |||     |.|   
  Fly   204 PPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQP---PPNYPKPAMMHPGGAGPMMMPGMPPAG 265

Human    74 --KPSPAGSRGSPVPAG--------AL-----QPPEYP-----------WMKEKKAAKKTALLPA 112
              :|.|.|..|.|:|.|        ||     .|||.|           ..:...|.:...:|..
  Fly   266 LVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGP 330

Human   113 AAAAATAAATGPACLSHKESLEIADGS------------------GGGS---------RRLRTAY 150
            |||||.||...|.......:..:|..|                  ..||         :|:|||:
  Fly   331 AAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAF 395

Human   151 TNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCK 215
            :.:|||:||..|..|:|:....|..:|..|:|:|.||||||||||.||||..|..|.....|..:
  Fly   396 SPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQR 460

Human   216 SLEDSEKVEEDEE 228
            ::.:....|:|:|
  Fly   461 NMHNGSGDEDDDE 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 22/79 (28%)
Antp-type hexapeptide 94..99 2/15 (13%)
Homeodomain 144..200 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 9/31 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279
emsNP_731868.1 Homeodomain 389..445 CDD:459649 29/55 (53%)
Blue background indicates that the domain is not in the aligned region.

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