DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA2 and inv

DIOPT Version :10

Sequence 1:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens
Sequence 2:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster


Alignment Length:237 Identity:67/237 - (28%)
Similarity:102/237 - (43%) Gaps:32/237 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    17 SLAE-CLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGAGGRPKPSPA-- 78
            |||. |..|....:....||:..||......:..||     |:...|:....|..|....:|.  
  Fly   357 SLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPP-----PAAGAGATGASGKSGEDSGTPIVW 416

Human    79 -----GSRGSPVPAGALQPPEYPWMKEKKAAKKTALLPAAAAAATAAATGPACLSHKESLEIADG 138
                 .:|.|..|:....|      :.:|..|     ||.:::|.....|..     |..|.|||
  Fly   417 PAWVYCTRYSDRPSSGRSP------RARKPKK-----PATSSSAAGGGGGGV-----EKGEAADG 465

Human   139 SG-GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQT 202
            .| ...:|.|||::.|||..|:.||:.|:||...||.:::..|.|.|.|:|:||||:|.|.|:.:
  Fly   466 GGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSS 530

Human   203 QCKENQNSEGKCKSLEDSEKV--EEDEEEKTLFEQALSVSGA 242
            ..|.....:...:.|.:...:  ..:|||....::|.|.:.|
  Fly   531 GTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAASAAAA 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 10/57 (18%)
Antp-type hexapeptide 94..99 0/4 (0%)
Homeodomain 144..200 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 4/32 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279
invNP_523699.3 Homeodomain 472..528 CDD:459649 26/55 (47%)
Engrail_1_C_sig 529..554 CDD:431338 2/24 (8%)
Blue background indicates that the domain is not in the aligned region.

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