DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA2 and cad

DIOPT Version :10

Sequence 1:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens
Sequence 2:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster


Alignment Length:277 Identity:71/277 - (25%)
Similarity:98/277 - (35%) Gaps:85/277 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    11 FINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIP--PPFEQTIPSL-------------- 59
            |:.:.|:.|..|...........|||..:|..|.|...|  |...:|..|:              
  Fly    94 FVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGA 158

Human    60 ---NPGS----HPRHGAGGRPKP------SPAGSRGSPVPAGA---------------------- 89
               .|||    |.:|.|.|.|.|      |...|.|:|..|.:                      
  Fly   159 TDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNN 223

Human    90 ------------------------LQPPEYPWMKEKKAAKKTALLPAAAAAATAAATGPACLSHK 130
                                    .:||.:.|||:          ||..|......:....|...
  Fly   224 NNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKK----------PAYPAQPQPDLSSSPNLEDL 278

Human   131 ESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRR 195
            ..|..|.|......:.|..||:.|.||||||:..::|:...|:.|:|..|.|:|||||:||||||
  Fly   279 SDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRR 343

Human   196 MKHKRQTQCKENQNSEG 212
            .|.::|.:...:.|..|
  Fly   344 AKERKQNKKGSDPNVMG 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 20/125 (16%)
Antp-type hexapeptide 94..99 1/4 (25%)
Homeodomain 144..200 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 3/15 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 28/54 (52%)
Blue background indicates that the domain is not in the aligned region.

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