DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2124 and tbrg4

DIOPT Version :9

Sequence 1:NP_572638.1 Gene:CG2124 / 31989 FlyBaseID:FBgn0030217 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001004904.2 Gene:tbrg4 / 448262 XenbaseID:XB-GENE-969727 Length:633 Species:Xenopus tropicalis


Alignment Length:699 Identity:126/699 - (18%)
Similarity:231/699 - (33%) Gaps:236/699 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LVRHCNRMELKISDSRYEAFT-----RCF-----------CEQLH----------RLTDEQLLGS 125
            ||:.|:|  |..:.:.|...|     .|.           |..||          .||.||.:.|
 Frog     5 LVQRCSR--LLAASTAYAPATHTHIHECMKVCHPAQPVLPCSSLHSSSLCRHKDKALTKEQTVSS 67

  Fly   126 LSALAELPVPESPKAKNYME----IWNTLDIECCRRI---------------------------- 158
                    |||..|.::.:|    :...|.:...|.|                            
 Frog    68 --------VPEHGKFESVLESLSSVEELLQLGVDREISGNQAAMIITQVSKVLMESKAQGGSVVQ 124

  Fly   159 -ERWSSEQLLL-----VSDAW-----------YRLGLVRIGEYVWLALKKLGRKLRKLPPEQLVH 206
             ||:  :|||:     :|..|           |.||:....:.:.....::..:||:|..:.|| 
 Frog   125 DERF--QQLLVQAHNQISTIWNGNLVSLLKRLYILGIREDNKQLQAVENEVRWRLRRLSFKSLV- 186

  Fly   207 SMFLCNLLRRPVFEMFDFELNLARCVDQMTLSELGVMAMGFFKTQTPIRNPELLTQLYQRLG--- 268
                         ::.|..:...|..:|..|  :..:........|.|.:.:.:..|..|:|   
 Frog   187 -------------QLSDLYVTFTRSPEQKHL--VSDLVKNLELRWTEIEDAKSVVTLMTRVGFIS 236

  Fly   269 -SELDTVEDIVLVALLKVLRYSSKLPQVEPLKKMLSALESQVDR-VSLLTCL-------HMAL-- 322
             :.::.:||       |.|.|:.:....| ::|:..||.:|..| |.||..|       |:.|  
 Frog   237 KALMEKLED-------KALEYAEQFTPDE-MRKVALALAAQNRRTVPLLRALSYHLVQRHIGLSP 293

  Fly   323 -----------------------LGCEL------QTCNDALVERILLRF---------------E 343
                                   :..:|      .:.||  :.|.:..|               :
 Frog   294 AVVVDLAFAYGKLNFHQTQVFQKMASDLLPKVPEMSAND--IARCVKSFAYLKWSNLPLFEAFAQ 356

  Fly   344 RELETARLKDMERIC-LVMALFNITTKSGVERRLAERLPDLLRQRI--EEILRHPRCFSNCLQFL 405
            ..::.:....:.::| ||:|...:..:....    |....::.|::  |..|..|....:.:..|
 Frog   357 ASIDQSEKFTVPQLCNLVLAFGRLNFQPSKR----EEFYSMMHQKLHAELDLLDPYLLVDIVWSL 417

  Fly   406 TMRGVYDLELLGVALEP----RFLKHAYPSGLPGR-EYFHLDGFARLLGPEYQGALVTEKQRQQM 465
            .:....|...:...|||    ||...:.|.....| :..|::..|.|..|||.|           
 Frog   418 CVLRQVDSSYISKVLEPGLYSRFFTDSSPRSANYRLKLAHINATALLEHPEYTG----------- 471

  Fly   466 GRNYTQYIPDRDGRFKLNNT-----DRILVEIRDAITMIHRPVTFKHILPQYD--RCDVVLCYDR 523
                 .::|:.    .::.|     :|.|..::..:..:     .:.:.|...  ||.|...|  
 Frog   472 -----PHLPNE----SISTTHAVTANRKLSPLQSGLQEV-----LRELFPVEGTCRCGVNTVY-- 520

  Fly   524 RQRKALSINGEACQDYSGEILT--------RKHLLGERKAADDQLVTVVIVIAGW---NNVIRDK 577
                ...|:||...|...:.|:        ..|..|::...:.   |.......|   |...|.|
 Frog   521 ----GWYIDGEVVLDSDNKPLSLMDLEAPHLPHSQGKKPLPEG---TRRFAFVAWDFPNFNSRSK 578

  Fly   578 DRFTGQMDMKLRQLRQLGHQPLVIYWHEWRELENSADRQDFLKRRLSQI 626
            | ..|:..:..|.|:..|...:.:.::||.:|::...:..:||.:::::
 Frog   579 D-LLGRFVLTRRHLQAAGFLVVEVPYYEWLDLKSEWQKSAYLKDKINKV 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2124NP_572638.1 RAP 565..622 CDD:214932 14/59 (24%)
tbrg4NP_001004904.2 FAST_1 371..439 CDD:399608 14/71 (20%)
FAST_2 453..537 CDD:400599 20/114 (18%)
RAP 565..622 CDD:214932 14/57 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21228
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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