DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2124 and Tbrg4

DIOPT Version :9

Sequence 1:NP_572638.1 Gene:CG2124 / 31989 FlyBaseID:FBgn0030217 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001012154.1 Gene:Tbrg4 / 360977 RGDID:1309737 Length:629 Species:Rattus norvegicus


Alignment Length:752 Identity:132/752 - (17%)
Similarity:227/752 - (30%) Gaps:283/752 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VGRLRRQ--VCTTIVSPARIFADRENQFAHGILMDSLKPYAILRPRDSAWQDLPASEGFMRPQPD 74
            |||||..  .|.|:.|                        ::..|...:..:|...|....|.|:
  Rat    26 VGRLRLAGVACKTLTS------------------------SVSSPSSGSLTELLGKEQVFTPYPE 66

  Fly    75 ASAADLYADFLGLVRHCNRME------------------------------------LKISDSRY 103
            ....|.      |:....|.|                                    |.:.|:|:
  Rat    67 HQEVDY------LIEKATRPEELLELLGGDHSLHHNHAALILIRLSYLLSEKPKEKALLVEDARF 125

  Fly   104 EAFTRCFCEQLHRLTDEQ--------LLGSLSALAELPVPESPKAKNYMEIWNTLDIECCRRIER 160
                    :||.||.|.|        |:..|.:|..|.:|:..|           ::....:..|
  Rat   126 --------QQLVRLVDSQITSVWHGTLVKLLRSLYTLVLPQGSK-----------ELRSVEQEVR 171

  Fly   161 WSSEQLLLVSDAWYRLGLVRIGEYVWLALKKLGRKLRKLPPEQLVHSM-FLCNLLRRPVFEMFDF 224
            |             ||..::....|:||     ........||  ||. .|..|||.       .
  Rat   172 W-------------RLRRLKYKHLVFLA-----ESCAPFMKEQ--HSKELLAELLRH-------L 209

  Fly   225 ELNLARCVDQMTLSELGVMAMGFFKTQTPIRNPELLTQLYQRLGSELDTVEDIVL---------V 280
            |.......|..||..:..|| |........|..:...:|.::.|.  |.:..:::         |
  Rat   210 ERRWTEISDSRTLVSMMTMA-GHLSESLMNRLEDKCLELVEQFGP--DELRKVLMTLAAQSRRSV 271

  Fly   281 ALLKVLRYSSKLPQVEPLKKMLSAL----------ESQVDR---VSLLTCLHMALLGCELQTC-- 330
            .||:.:.|..........|.||..|          ::||.:   ..||..:.....| |:..|  
  Rat   272 PLLRAISYHLVQKPFPMTKGMLLDLAYAYGKLSFHQTQVAQRLAADLLPFIPSMTPG-EVARCAK 335

  Fly   331 --------NDALVERILLRFERELETARLKDMERICLVMALFNITTKSGVERRLAERLPDLLRQR 387
                    |..|.|...   :..|.:|:...:..:|.|:..|   .:........::..:|:.::
  Rat   336 SFAFLKWLNLPLFEAFT---QHLLNSAQDVSLSHLCSVLLAF---ARLNFHPEQEDQFFNLVHEK 394

  Fly   388 IEEI-------LRHPRCFSNCLQFLTMRGVYDLE-LLGVALEPRFLKHAYPSGLPG-REYFHLDG 443
            ::.:       |:....::.|:  |....|.:|: :|...|..|||:...|..... ::..|::.
  Rat   395 LDSVLGSLEPALQVDLVWALCV--LQQVQVAELQTVLHPGLHTRFLESKSPKDQSTFQKLVHINS 457

  Fly   444 FARLLGPEYQGALV------------------TEKQRQQ-----MGRN-------YTQY------ 472
            .|.|..|||:|..:                  .:|:.|.     :|.|       .|||      
  Rat   458 TALLEYPEYKGPFLPASAVAPSPSPSNKKMTPLQKELQDALKALLGNNDTGSLEVATQYGWVLDA 522

  Fly   473 --IPDRDGRFKLNNTDRILVEIRDAIT-MIHRPVTFKHILPQYDRCDVVLCYDRRQRKALSINGE 534
              :.|.:|.|         :.:||.:. .:.:||..:.:.|...|                    
  Rat   523 EVLLDAEGHF---------LPLRDFVAPHLAQPVGNQPLPPGAKR-------------------- 558

  Fly   535 ACQDYSGEILTRKHLLGERKAADDQLVTVVIVIAGW---NNVIRDKDRFTGQMDMKLRQLRQLGH 596
                                          |....|   |...|.|| ..|:..:..|.:...|.
  Rat   559 ------------------------------IAFLRWEFPNFNSRSKD-LLGRFVLARRHVLAAGF 592

  Fly   597 QPLVIYWHEWRELENSADRQDFLKRRL-----SQIAK 628
            ..:.:.::||.:|::...:..:||.::     .::||
  Rat   593 LVVDVPYYEWLDLKSEWQKTAYLKDKMRKAVAEELAK 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2124NP_572638.1 RAP 565..622 CDD:214932 14/59 (24%)
Tbrg4NP_001012154.1 FAST_1 368..436 CDD:399608 11/72 (15%)
FAST_2 450..533 CDD:400599 17/91 (19%)
RAP 561..618 CDD:214932 13/57 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21228
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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