Protein Alignment Hmr and CG10949

DIOPT Version :10

• Sequence 1: NP_572637.2
• Gene: Hmr / 31988
• FlyBaseID: FBgn0001206
• Length: 1413
• Species: Drosophila melanogaster
• Sequence 2: NP_610032.1
• Gene: CG10949 / 35310
• FlyBaseID: FBgn0032858
• Length: 459
• Species: Drosophila melanogaster
• Alignment Length: 514
• Identity: 104/514 - (20%)
• Similarity: 162/514 - (31%)
• Gaps: 189/514 - (36%)

  Fly    59 LIALVRRQPLLYD---ARHPKFRDVAQREKQWKKIASRLATNATNCKRSWSALRYKYQRHVRRLR 120
            ||.|:.|.|:|||   ||..|  :.||::..||.|:.:|..:...|...|.::|.::.:..||.:
  Fly     6 LIKLIERHPILYDKDCARSVK--NAAQKDAAWKAISQKLGASERACITRWKSIRDRFGKEFRRFQ 68

  Fly   121 NFHRSAIQKDRAALRWRPCMEYEEEMRFMYTHVARFPLIVDKIPTEILEKEHVDESETRPD---- 181
            .               ||     :|           |...|..|..:..|:|..:...|.:
  Fly    69 E---------------RP-----DE-----------PTYWDMFPRLLFLKDHYKQGLARNESLDG 102

  Fly   182 --VEVIENPPMDIIDL-------DVEEDPTYNYRCNRLQRRLIEAVSAYPLLYDSTCTGYQNTRH 237
              .|..|......:|:       |.||:.:.:   :.|..:|||.|.::|:|||         ||
  Fly   103 MRFEPRERKKRTKVDMEQERRRKDEEEEDSQD---DLLNEQLIELVKSHPVLYD---------RH 155

  Fly   238 RFLI----------WSAISNEVHDKATKLMKCWLKLQTRYEWELIHRPRHIGTSELCRLMDFMEP 292
            :..:          |..||..::.........|.||:.|:..|.  |...|..|         .|
  Fly   156 KIRVSKNLAAKNEAWREISENLNVSEELCYNRWKKLRDRFGREF--RSHQINQS---------TP 209

  Fly   293 HVQRMRGTVCKSSKYLQNGWHEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDE--- 354
            ...|....:....::.:.|                        |.|..:::..:.:||:...
  Fly   210 ITWRYFNDLLFLGRHFRKG------------------------VPLVLENIKRRGRPPKAGNPSG 250

  Fly   355 --FWQKVGMEVMCSHEHCEVTWLVLRAFYHELQAVRSSGYQL--------QDKWFFEGSMGLA-- 407
              ..|..||                         |.|||.|:        .|....|..:.||
  Fly   251 KTSKQPEGM-------------------------VISSGEQIWGADYPYSTDNDDLEDDLELAYD 290

  Fly   408 -----------LTP---VTSRSTARPALKRTANGAIPVAGEPPAKTPVPVRMP---------LAI 449
                       .||   :.|.:|||..|            |||.:..|....|         :|.
  Fly   291 EEIEILSEAEQATPYDFILSEATARQDL------------EPPQQLQVTTTTPATSEEIIHTIAR 343

  Fly   450 VYPSTSKGSSTSMTNSASTATSIGPTFTNVRRSSGPVINNTSTAAAATNSVSSSVSPDQ 508
            |.|...:.||....:..|.|.|.....|        ||.|..|....:..:.:.:..:|
  Fly   344 VNPVVEESSSLPGDSVPSAAISDKLLTT--------VIANMETVLQQSRELQAQIHHEQ 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmr	NP_572637.2	MADF_DNA_bdg	59..149	CDD:463144	25/92 (27%)
		GT1	213..295	CDD:474047	22/91 (24%)
		PHA03247	<474..864	CDD:223021	6/35 (17%)
CG10949	NP_610032.1	MADF	5..91	CDD:214738	30/117 (26%)
		MADF	140..226	CDD:214738	23/105 (22%)