DRSC/TRiP Functional Genomics Resources

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Protein Alignment spri and VPS9

DIOPT Version :10

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:NP_013612.1 Gene:VPS9 / 854876 SGDID:S000004563 Length:451 Species:Saccharomyces cerevisiae


Alignment Length:340 Identity:66/340 - (19%)
Similarity:105/340 - (30%) Gaps:102/340 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1627 KLNNGNGNGKAN--------NRPKVATILRNPSMRDREVLCHPRNKMSIQSSGPGDSLRAYTLQL 1683
            :|...|||...:        ||.......|:.|.:|:                 ||....|..|:
Yeast    18 QLEQANGNPDKDVKFKKDDPNRAAAEETNRDISAQDK-----------------GDEEPFYDFQI 65

  Fly  1684 --------AQDP----SSTFARN-------------------IENFICCTKESREAAPQVVMRNM 1717
                    ..||    :.:|.||                   .:.||.......|....:....|
Yeast    66 FIKQLQTPGADPLVKYTKSFLRNFLAQRLLWTVSEEIKLISDFKTFIYDKFTLYEPFRSLDNSKM 130

  Fly  1718 RQFMSGMKNYLVKHGEGK-----FHAELETARARLKSDEFL----NLDAMLETVMHQLVVLPLRE 1773
            |....||:..::    ||     |...|.....:...||.:    |.|.:||.:.|...:.|:  
Yeast   131 RNAKEGMEKLIM----GKLYSRCFSPSLYEILQKPLDDEHMKDLTNDDTLLEKIRHYRFISPI-- 189

  Fly  1774 HLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGIRPTVTPPSQAALRLIANLLWRLQEAELPL 1838
                        ..||.....|.|.                   ...:.|.:..|.::...:.|.
Yeast   190 ------------MLDIPDTMPNARL-------------------NKFVHLASKELGKINRFKSPR 223

  Fly  1839 DKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAKCGFVGAEIEAEFMWGLLQPTLLNGE 1903
            ||:...|.....:|......:.:|.|||.|:|||:|.:.|...........::.....|..:.||
Yeast   224 DKMVCVLNASKVIFGLLKHTKLEQNGADSFIPVLIYCILKGQVRYLVSNVNYIERFRSPDFIRGE 288

  Fly  1904 PGYYLTALCSAVQVL 1918
            ..|||::|.:|:..:
Yeast   289 EEYYLSSLQAALNFI 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:472789
VPS9 1824..1922 CDD:460489 24/95 (25%)
RA_Rin 1946..2030 CDD:340474
VPS9NP_013612.1 DUF5601 80..146 CDD:465668 12/69 (17%)
VPS9 205..321 CDD:128469 25/99 (25%)
CUE_VPS9_like 408..449 CDD:270552
Blue background indicates that the domain is not in the aligned region.

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