DRSC/TRiP Functional Genomics Resources

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Protein Alignment spri and vps9d1

DIOPT Version :10

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:NP_001072861.1 Gene:vps9d1 / 780322 XenbaseID:XB-GENE-1014900 Length:640 Species:Xenopus tropicalis


Alignment Length:754 Identity:140/754 - (18%)
Similarity:236/754 - (31%) Gaps:273/754 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1209 PALDTVGGVMNRRPDLLAETPSTPTPTQQSHLTPCEEETTATPNESSSQSLLQFSGDVPARSRAG 1273
            |...:.....:|...|.:.:||:      ||...|.:||         |.|..|           
 Frog   109 PHASSAASATSRLSSLSSISPSS------SHRRTCSDET---------QKLSSF----------- 147

  Fly  1274 LLLPNLSGQVPPVAMTKSMTAAEDDGG--DTTPTAEGQANGAS-------RSKQGSPFYAEPADA 1329
                      ||..:.:.:.|||...|  :.||..|.......       |..:.:|        
 Frog   148 ----------PPPEIFQMLLAAEVQRGKKELTPLEEASIQNQKLKAAYEVRLARLNP-------- 194

  Fly  1330 LRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGGSGNGAMLQPSDLEKLAGSLDELKPKP 1394
             |||...::.|..|:||....::.|..|.                      |.|           
 Frog   195 -RQAAAKTSLTLSLQRQMMENLVIAKARE----------------------ETL----------- 225

  Fly  1395 KVSQQQQQSQQQQQPTKRARNRIDHWQLDSSWEFMAKQDTGSHAGGDYDTAAIDWQEKENSLGRD 1459
                 |:::::::|..|...||......|.:.| |.:|..       ..||.:::::        
 Frog   226 -----QRKAEERRQRLKEESNRRFSLNTDMTPE-MEEQRV-------LYTAVLEYEQ-------- 269

  Fly  1460 SRADGQGKKRTLTIHQIIANRLPDLNLPELVRC---STPPQTAALQPHVLGQDKAGVGCDGSQKS 1521
               |.:..||   ..|.|.....|.:|.....|   |||                    |.....
 Frog   270 ---DHEWPKR---FKQKIKGNPADTDLVSSFMCQVLSTP--------------------DHPVSK 308

  Fly  1522 FQSQIGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPWDSSQWDTFLPHDDATINSDTIHLSKC 1586
            ..:.:.|::  |..|:               ..|..:|         :.|:..|  ||..|.|..
 Frog   309 LLTNLQCQI--YSRVY---------------PVIIKDP---------MEHNHGT--SDVFHQSLP 345

  Fly  1587 RPALSEDDTIVEELQSTKDGSNGSCNQDTLKANRNGAGHHKLNNGNG--NGKANNRPKVATILRN 1649
            ..||....:..:.|:|::   :..|....|:.:..    |.|:.|.|  :.:|.|          
 Frog   346 TDALPSPASNSQHLKSSQ---SLQCLPSLLQPSVK----HSLSTGEGFEHLEATN---------- 393

  Fly  1650 PSMRDREVLCHPRNKMSIQSSGPGDSLRAYTLQLAQDPSSTFARNIENFICCTKESREAAPQVVM 1714
                |:.:           ..||.|..|..:.:           ::|:.:..|:.|        :
 Frog   394 ----DKLI-----------DKGPCDKERENSFE-----------DLEHCLSPTEYS--------I 424

  Fly  1715 RNMRQFMSGMKNYLVKHGEGKFHAELETARARLKSDEFLNL-------DAMLETV---------- 1762
            .|.....|.:...:||        |:..|:..|.|...|:|       |..:|.:          
 Frog   425 GNASLTASALLKAVVK--------EIHNAKDLLLSASLLDLPPNTIFKDVCVECIDESFFPPIWP 481

  Fly  1763 ----MHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGIRPTVTPPSQAALRL 1823
                :::.|:|...|.|......:...::.:..:.|.:            ....|..|.:||:..
 Frog   482 ALLALYRHVLLAREESLLQAMKSYRDNAQSVVGVPQKL------------FPEEVEQPYKAAVEE 534

  Fly  1824 IANLLWRLQEAELPLDKLELFLCVISTVFDATGC-------PRGQQLGADDFLPVLVYVVAKCGF 1881
            |.:|...    ..|..|:|   |::.|:.....|       |....:||||.||:|.:||.|...
 Frog   535 IGHLPLH----HTPQRKME---CIVRTMRVICECAEEYCTAPGTSAIGADDLLPILAFVVLKTQM 592

  Fly  1882 VGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKT 1920
            .....|...:...:....|.||.||.||:|.||:..:::
 Frog   593 PQLLSECAALEEFIHEGYLIGEDGYCLTSLLSALSYVES 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:472789
VPS9 1824..1922 CDD:460489 30/104 (29%)
RA_Rin 1946..2030 CDD:340474
vps9d1NP_001072861.1 VPS9 528..632 CDD:460489 32/111 (29%)
Blue background indicates that the domain is not in the aligned region.

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