DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spri and Rin2

DIOPT Version :10

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:NP_001393437.1 Gene:Rin2 / 74030 MGIID:1921280 Length:903 Species:Mus musculus


Alignment Length:1404 Identity:283/1404 - (20%)
Similarity:435/1404 - (30%) Gaps:582/1404 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   660 ELSQSRTSLVSSSEGGILAEGETSSEDDEEEPVEAED-EGEESSRDSSDNSPPCDLGLMERLLVT 723
            ||.:.......|.|.| |...||.|....::...:|| :|:...|||..:|....|.:::|||.|
Mouse    30 ELKREMVQTDISRENG-LEPSETHSMVRHKDGGYSEDKDGKTCPRDSGYDSLSNRLSILDRLLHT 93

  Fly   724 HPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTGPYIEHYLIQSHDNVLSL 788
            ||:|....:....|..:||.:..|.|:||.||:.....:|:|||.:.|..::.:.|:......||
Mouse    94 HPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQKKVLSLRLPCEFGAPLKEFTIKESTYTFSL 158

  Fly   789 ESSRFTFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKKLSSLALLGQEFWSYVSSPALLGP 853
            |.|..:|..:..|||.|....|.||..|.||..:..|....:|..||.||..|||          
Mouse   159 EGSGISFADLFRLIAFYCISRDVLPFTLKLPYAISTAKTESQLEELAQLGLNFWS---------- 213

  Fly   854 LTPSVAPSKDQQLLDAKSPLSLTETSGLGTATFFSDTVSKPPPTGAPPLPGGGLFSPTGSGQLL- 917
               |.|.:|         ||                  :.|||  ..|||..|: .|....||. 
Mouse   214 ---SSADNK---------PL------------------NSPPP--HRPLPSAGI-CPASLRQLCL 245

  Fly   918 --GFFS-QAGTPSD----TTNSSLSSFTTSGGQHMQLLSPNSVDSVILTMSPVDNPGHYLPGSTG 975
              |..| :..|||:    .||.:|....                                     
Mouse   246 INGVHSIKTRTPSELECSQTNGALCFIN------------------------------------- 273

  Fly   976 APMAPLCPSVVDQQLSTFKVAQTAPEVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQNGSAN 1040
                ||...|..|.|||                .||.|:|               .:|:.||:..
Mouse   274 ----PLFLKVHSQDLST----------------GPKRPST---------------RTPNANGTER 303

  Fly  1041 GNFTVTTTVTFSMENGGGGGSGPTVGNGNGKFVEVTTPAASNPFNALLNGQASTFQTFAKRLSPE 1105
                                                                             
Mouse   304 ----------------------------------------------------------------- 303

  Fly  1106 GECKDTLSSQGSSSNDSRWPPPARKLLTSPMTPLTPSGGSSSSGGKSRKSRAGKESQHYKESDIL 1170
                            .|.|||                                           
Mouse   304 ----------------PRSPPP------------------------------------------- 309

  Fly  1171 ESPPMQYCASALSDKISDYEDVWSHDPSDRASLLTSFRPALDTVGGVMNRRPDLLAETPSTPTPT 1235
            ..||                                  ||:::    ::..|.|....|.|..|.
Mouse   310 RPPP----------------------------------PAINS----LHTSPGLSRTEPQTSMPE 336

  Fly  1236 QQSHLTPCEEETTATPNESSSQSLLQFSGDVPARSRAGLLLPNLSGQVPPVAMTKSMTAAEDDGG 1300
            ..:|            ::..:.:||   |..|.             .:||..:            
Mouse   337 TVNH------------SKHGNVALL---GTKPT-------------PIPPPRL------------ 361

  Fly  1301 DTTPTAEGQANGASRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAG 1365
                           .||.|...||          :||.|...||         ..|.||     
Mouse   362 ---------------KKQASFLEAE----------SSAKTLTARR---------PSRRSE----- 387

  Fly  1366 FGGSGNGAMLQPSDLEKLAGSLDELKPKPKVSQQQQQSQQQQQPTKRARNRIDHWQLDSSWEFMA 1430
                                      |:|::                              |...
Mouse   388 --------------------------PEPEL------------------------------ELEL 396

  Fly  1431 KQDTGSHAGGDYDTAAIDWQEKENSLGRDSRADGQGKKRTLTIHQIIANRLPDLNLPELVRCSTP 1495
            :..|..||||              :..||:..|              ..|.|            |
Mouse   397 EMGTAGHAGG--------------APPRDAPGD--------------CTRAP------------P 421

  Fly  1496 PQTAALQPHVLGQDKAGVGCDGSQKSFQSQIGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPW 1560
            |          |.:.....|.|:::        |||                             
Mouse   422 P----------GSESQPPPCHGARQ--------RLS----------------------------- 439

  Fly  1561 DSSQWDTFLPHDDATINSDTIHLSKCRPALS-EDDTIVEELQSTKDGSNGSCNQDTLKANRNGAG 1624
                 |..|    :|.:||::...:..|... |.||     .|:.:...|..:|:|:..      
Mouse   440 -----DMSL----STSSSDSLEFDRSMPLYGYEADT-----TSSLEDYEGESDQETMAP------ 484

  Fly  1625 HHKLNNGNGNGKANNRPKVATILRNPSMRDREVLCHPRNKMS-IQSS--GPGDSLRAYTLQLAQD 1686
                            |..:...||.|....:::.....||| :.||  .|...:.....:|::|
Mouse   485 ----------------PIKSKKKRNSSFVLPKLVKSQLRKMSGVFSSFMTPEKRMVRRIAELSRD 533

  Fly  1687 PSSTFARNIENFICCTKESRE--AAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETARARLKS 1749
            ..:.|...:::::...||::|  .:...:::.:||||:.:||||.:      .:||:.....|..
Mouse   534 KCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYLSQ------SSELDPPIESLIP 592

  Fly  1750 DEFLNLDAMLETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGI-RPTV 1813
            ::  .:|.:||..||:.::.||:.|:..:..|.:......:.|.:|::...:|...:.|: .|| 
Mouse   593 ED--QIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVRQRNPQELGVFAPT- 654

  Fly  1814 TPPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAK 1878
              |....|..|......:|:...|..|:.|.|.|...::.......|:..|||||||||.||:|:
Mouse   655 --PDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGADDFLPVLTYVIAQ 717

  Fly  1879 CGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASE------GESGSGSLDWR- 1936
            |..:..:.|.|:|..||.|:||:||.|||||:...|:.::|.|...:      .|:......|. 
Mouse   718 CDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLLSSEARDTLRQWHK 782

  Fly  1937 ----SSCLPAC---SSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALF 1994
                :..:|:.   .:.|||.. .|.|.....:||.|||:.||.:||::.|.|.::.:|::|:||
Mouse   783 RRTTNRTIPSVDDFQNYLRVAF-QEVNSGCTGKTLLVRPYITTEDVCQLCAEKFKVEDPEEYSLF 846

  Fly  1995 KLVDGEETLLTDAECPQDARLAAKGK---HCM-LAYKRI 2029
            ..||.....|.:...||..:.....:   |.. ..||||
Mouse   847 LFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRI 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:472789 32/96 (33%)
VPS9 1824..1922 CDD:460489 38/97 (39%)
RA_Rin 1946..2030 CDD:340474 30/88 (34%)
Rin2NP_001393437.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..73 8/29 (28%)
SH2_RIN2 86..185 CDD:198257 34/98 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..455 70/596 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 471..491 4/41 (10%)
Interaction with RAB5B. /evidence=ECO:0000250 506..775 80/279 (29%)
VPS9 659..775 CDD:128469 41/115 (36%)
RA_Rin2 796..886 CDD:340548 30/91 (33%)

Return to query results.
Submit another query.