DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spri and Rin2

DIOPT Version :9

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:XP_006500332.1 Gene:Rin2 / 74030 MGIID:1921280 Length:903 Species:Mus musculus


Alignment Length:1404 Identity:283/1404 - (20%)
Similarity:435/1404 - (30%) Gaps:582/1404 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   660 ELSQSRTSLVSSSEGGILAEGETSSEDDEEEPVEAED-EGEESSRDSSDNSPPCDLGLMERLLVT 723
            ||.:.......|.|.| |...||.|....::...:|| :|:...|||..:|....|.:::|||.|
Mouse    30 ELKREMVQTDISRENG-LEPSETHSMVRHKDGGYSEDKDGKTCPRDSGYDSLSNRLSILDRLLHT 93

  Fly   724 HPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTGPYIEHYLIQSHDNVLSL 788
            ||:|....:....|..:||.:..|.|:||.||:.....:|:|||.:.|..::.:.|:......||
Mouse    94 HPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQKKVLSLRLPCEFGAPLKEFTIKESTYTFSL 158

  Fly   789 ESSRFTFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKKLSSLALLGQEFWSYVSSPALLGP 853
            |.|..:|..:..|||.|....|.||..|.||..:..|....:|..||.||..|||          
Mouse   159 EGSGISFADLFRLIAFYCISRDVLPFTLKLPYAISTAKTESQLEELAQLGLNFWS---------- 213

  Fly   854 LTPSVAPSKDQQLLDAKSPLSLTETSGLGTATFFSDTVSKPPPTGAPPLPGGGLFSPTGSGQLL- 917
               |.|.:|         ||                  :.|||  ..|||..|: .|....||. 
Mouse   214 ---SSADNK---------PL------------------NSPPP--HRPLPSAGI-CPASLRQLCL 245

  Fly   918 --GFFS-QAGTPSD----TTNSSLSSFTTSGGQHMQLLSPNSVDSVILTMSPVDNPGHYLPGSTG 975
              |..| :..|||:    .||.:|....                                     
Mouse   246 INGVHSIKTRTPSELECSQTNGALCFIN------------------------------------- 273

  Fly   976 APMAPLCPSVVDQQLSTFKVAQTAPEVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQNGSAN 1040
                ||...|..|.|||                .||.|:|               .:|:.||:..
Mouse   274 ----PLFLKVHSQDLST----------------GPKRPST---------------RTPNANGTER 303

  Fly  1041 GNFTVTTTVTFSMENGGGGGSGPTVGNGNGKFVEVTTPAASNPFNALLNGQASTFQTFAKRLSPE 1105
                                                                             
Mouse   304 ----------------------------------------------------------------- 303

  Fly  1106 GECKDTLSSQGSSSNDSRWPPPARKLLTSPMTPLTPSGGSSSSGGKSRKSRAGKESQHYKESDIL 1170
                            .|.|||                                           
Mouse   304 ----------------PRSPPP------------------------------------------- 309

  Fly  1171 ESPPMQYCASALSDKISDYEDVWSHDPSDRASLLTSFRPALDTVGGVMNRRPDLLAETPSTPTPT 1235
            ..||                                  ||:::    ::..|.|....|.|..|.
Mouse   310 RPPP----------------------------------PAINS----LHTSPGLSRTEPQTSMPE 336

  Fly  1236 QQSHLTPCEEETTATPNESSSQSLLQFSGDVPARSRAGLLLPNLSGQVPPVAMTKSMTAAEDDGG 1300
            ..:|            ::..:.:||   |..|.             .:||..:            
Mouse   337 TVNH------------SKHGNVALL---GTKPT-------------PIPPPRL------------ 361

  Fly  1301 DTTPTAEGQANGASRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAG 1365
                           .||.|...||          :||.|...||         ..|.||     
Mouse   362 ---------------KKQASFLEAE----------SSAKTLTARR---------PSRRSE----- 387

  Fly  1366 FGGSGNGAMLQPSDLEKLAGSLDELKPKPKVSQQQQQSQQQQQPTKRARNRIDHWQLDSSWEFMA 1430
                                      |:|::                              |...
Mouse   388 --------------------------PEPEL------------------------------ELEL 396

  Fly  1431 KQDTGSHAGGDYDTAAIDWQEKENSLGRDSRADGQGKKRTLTIHQIIANRLPDLNLPELVRCSTP 1495
            :..|..||||              :..||:..|              ..|.|            |
Mouse   397 EMGTAGHAGG--------------APPRDAPGD--------------CTRAP------------P 421

  Fly  1496 PQTAALQPHVLGQDKAGVGCDGSQKSFQSQIGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPW 1560
            |          |.:.....|.|:::        |||                             
Mouse   422 P----------GSESQPPPCHGARQ--------RLS----------------------------- 439

  Fly  1561 DSSQWDTFLPHDDATINSDTIHLSKCRPALS-EDDTIVEELQSTKDGSNGSCNQDTLKANRNGAG 1624
                 |..|    :|.:||::...:..|... |.||     .|:.:...|..:|:|:..      
Mouse   440 -----DMSL----STSSSDSLEFDRSMPLYGYEADT-----TSSLEDYEGESDQETMAP------ 484

  Fly  1625 HHKLNNGNGNGKANNRPKVATILRNPSMRDREVLCHPRNKMS-IQSS--GPGDSLRAYTLQLAQD 1686
                            |..:...||.|....:::.....||| :.||  .|...:.....:|::|
Mouse   485 ----------------PIKSKKKRNSSFVLPKLVKSQLRKMSGVFSSFMTPEKRMVRRIAELSRD 533

  Fly  1687 PSSTFARNIENFICCTKESRE--AAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETARARLKS 1749
            ..:.|...:::::...||::|  .:...:::.:||||:.:||||.:      .:||:.....|..
Mouse   534 KCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYLSQ------SSELDPPIESLIP 592

  Fly  1750 DEFLNLDAMLETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGI-RPTV 1813
            ::  .:|.:||..||:.::.||:.|:..:..|.:......:.|.:|::...:|...:.|: .|| 
Mouse   593 ED--QIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVRQRNPQELGVFAPT- 654

  Fly  1814 TPPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAK 1878
              |....|..|......:|:...|..|:.|.|.|...::.......|:..|||||||||.||:|:
Mouse   655 --PDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGADDFLPVLTYVIAQ 717

  Fly  1879 CGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASE------GESGSGSLDWR- 1936
            |..:..:.|.|:|..||.|:||:||.|||||:...|:.::|.|...:      .|:......|. 
Mouse   718 CDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLLSSEARDTLRQWHK 782

  Fly  1937 ----SSCLPAC---SSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALF 1994
                :..:|:.   .:.|||.. .|.|.....:||.|||:.||.:||::.|.|.::.:|::|:||
Mouse   783 RRTTNRTIPSVDDFQNYLRVAF-QEVNSGCTGKTLLVRPYITTEDVCQLCAEKFKVEDPEEYSLF 846

  Fly  1995 KLVDGEETLLTDAECPQDARLAAKGK---HCM-LAYKRI 2029
            ..||.....|.:...||..:.....:   |.. ..||||
Mouse   847 LFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRI 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:301589 32/96 (33%)
VPS9 1821..1922 CDD:280383 39/100 (39%)
UBQ 1946..2026 CDD:294102 26/83 (31%)
Rin2XP_006500332.1 SH2_RIN2 86..185 CDD:198257 34/98 (35%)
VPS9 659..775 CDD:128469 41/115 (36%)
RA_Rin2 796..886 CDD:340548 30/91 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8927
eggNOG 1 0.900 - - E1_KOG2320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 244 1.000 Inparanoid score I3280
Isobase 1 0.950 - 1 Normalized mean entropy S6079
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001291
OrthoInspector 1 1.000 - - otm44014
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23101
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3144
SonicParanoid 1 1.000 - - X2330
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.940

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