DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spri and rin2b

DIOPT Version :9

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:XP_017212050.1 Gene:rin2b / 565615 ZFINID:ZDB-GENE-030131-7043 Length:899 Species:Danio rerio


Alignment Length:1442 Identity:264/1442 - (18%)
Similarity:412/1442 - (28%) Gaps:627/1442 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 SRRSSSVDPDADADDVVDAAHGGAFEDDM--QALLPKCSRRSRDELSQSRTSLVSSSEGGILAEG 680
            |.:.|.:|.......:|||.   |...|.  |.::.....:.||....|.||::...||..|...
Zfish     5 SAQPSRMDRSGSFLQLVDAF---ALSLDQLEQQIIHAVQEKDRDPDRDSDTSMLIQIEGECLQYP 66

  Fly   681 ETSSEDDEEEPVEAEDEGEESSRDSSDNSPPCDLGLMERLLVTHPMWFLPGIQRSGAVHLLQGKE 745
            |.              :|..:|...|         ::::|:.|||:|.|..|.:..|..:|..:.
Zfish    67 EV--------------DGACASSGVS---------VLDKLIHTHPIWLLLSIDQQEATGILLQQP 108

  Fly   746 EGTFIVRGSSQPNTMAVSVRLPQDTGPYIEHYLIQSHDNVLSLESSRFTFGSIPSLIAHYAQCCD 810
            .|.|:|..||......:|.::...:...:.|..::......|||.|..:|..:..|:|.|....|
Zfish   109 AGVFLVWKSSVLQKKMLSFQMRDASDACVLHVPVKESQYTFSLEGSNISFADLFRLVAFYCISRD 173

  Fly   811 ELPVQLMLPRVLREANNRKKLSSLALLGQEFWSYVSSPALLGPLTPSVAPSKDQQLLDAKSPLSL 875
            .||..|.||..:..|.....|..:|..|..||..                |.:||.....:|.||
Zfish   174 ILPSTLKLPEAIYSAETLSDLHEVAKQGAGFWEC----------------SLNQQHRTFSAPGSL 222

  Fly   876 -----TETSGLGTATFFSDTV----SKPPPTG--APPLPGGGLFSPTGSGQLLGFFSQAGTPSDT 929
                 |.....||.   ||.:    ....|||  .|||...   ||..|             ...
Zfish   223 LVQGRTSICIEGTC---SDVLPGEDQTCSPTGNLIPPLTDN---SPNAS-------------KGE 268

  Fly   930 TNSSLSSFTTSGGQHMQLLSPNSVDSVILTMSPVDNPGHYLPGSTGAPMAPLCPSVVDQQLSTFK 994
            ::|:||....:..:..|.||.|:...:...::..:...|..|                       
Zfish   269 SSSALSFINPTFLKTQQDLSQNAATVITDDLAAGNRKSHPAP----------------------- 310

  Fly   995 VAQTAPEVDQVRPQRPKPPNTLNLKPPAP------PLRWSKPHSPDQNGSANGNFTVTTTVTFSM 1053
                        |.||.||..|...|..|      |||                           
Zfish   311 ------------PPRPPPPRILICGPVVPQISRNMPLR--------------------------- 336

  Fly  1054 ENGGGGGSGPTVGNGNGKFVEVTTPAASNPFNALLNGQASTFQTFAKRLSPEGECKDTLSSQGSS 1118
                                                         |.|:|...  |....|.||.
Zfish   337 ---------------------------------------------ASRMSQRP--KSVTGSTGSK 354

  Fly  1119 SNDSRWPPPARKLLTSPMTPLTPSGGSSSSGGKSRKSRAGKESQHYKESDILESPPMQYCASALS 1183
            ...|:.|        :|..|..|                  :...|:            |..||.
Zfish   355 HPSSKKP--------APRPPEPP------------------DIDSYR------------CTIALD 381

  Fly  1184 DKISDYEDVWSHDPSDRASLLTSFRPALDTVGGVMNRRPDLLAETPSTPTPTQQSHLTPCEEETT 1248
            |                           ||:...:::              ..|||        |
Zfish   382 D---------------------------DTISRAISQ--------------ANQSH--------T 397

  Fly  1249 ATPNESSSQSLLQFSG-DVPARSRAGLLLPNLSGQVPPVAMTKSMTAAEDDGGDTTPTAEGQANG 1312
            ...|.|||..|.|::| :...||.:|                :|::.:..|..|:.|        
Zfish   398 TLLNPSSSSILQQWTGQEEKGRSSSG----------------QSLSTSSSDSLDSPP-------- 438

  Fly  1313 ASRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGGSGNGAMLQP 1377
                                              |...:.|.||                     
Zfish   439 ----------------------------------HPLPLGHVSQ--------------------- 448

  Fly  1378 SDLEKLAGSLDELKPKPKVSQQQQQSQQQQQPTKRARNRIDHWQLDSSWEFMAKQDTGSHAGGDY 1442
                                                                         |...
Zfish   449 -------------------------------------------------------------GLST 452

  Fly  1443 DTAAIDWQEKENSLG----RD----SRADGQGKKRTLTIHQIIANRLPDLNLPELVRCSTPPQTA 1499
            |.:..|:.|:|...|    ||    .||..:.||  |...:::..|...|.||..:|        
Zfish   453 DDSTDDYDEEEEDYGVGLERDLQLRLRASRKSKK--LLAVELVGTRPRSLVLPRALR-------- 507

  Fly  1500 ALQPHVLGQDKAGVGCDGSQKSFQSQIGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPWDSSQ 1564
                                                                             
Zfish   508 ----------------------------------------------------------------- 507

  Fly  1565 WDTFLPHDDATINSDTIHLSKCRPALSEDDTIVEELQSTKDGSNGSCNQDTLKANRNGAGHHKLN 1629
                             |..|.|..|:                                      
Zfish   508 -----------------HFRKVRGVLN-------------------------------------- 517

  Fly  1630 NGNGNGKANNRPKVATILRNPSMRDREVLCHPRNKMSIQSSGPGDSLRAYTLQLAQDPSSTFARN 1694
                                       ||..|..::.:|           .::|:||..|.|...
Zfish   518 ---------------------------VLATPEKRILLQ-----------IIELSQDKGSYFGCL 544

  Fly  1695 IENFICCTKESR--EAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETARARLKSDEFLNLDA 1757
            :::::...:|::  .::.|.:::.:||||:.||.||.:..|  .:..:|   :.:..|:   :|.
Zfish   545 VQDYVSFVQENKNCHSSSQDLLQTIRQFMTQMKAYLKQSSE--MNPPIE---SYMPEDQ---IDP 601

  Fly  1758 MLETVMHQLVVLPLREHLYGIF---VDHYQRSEDI-QLLAQNVRYACEREAADFGIRPTVTPPSQ 1818
            :||..||:.|:.|    |||..   :..:|.:..: |.|.:|:..|..:...:.|:.....|.:.
Zfish   602 VLEKAMHKCVLKP----LYGCLHSALHEFQAAAGVWQTLQENLAIAKTKRPNELGVNGAQAPDTH 662

  Fly  1819 AALRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAKCGFVG 1883
            |..| |...|..:.....|..|:.:.|.|...::........:..|||||||:|.||:.:|....
Zfish   663 AIQR-IRRKLRAMCSMYSPERKIMVLLKVCKLIYSIMQEHEVRMFGADDFLPMLTYVLVQCDMPQ 726

  Fly  1884 AEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASE-----GESGSGSL-DWR-----S 1937
            .:.|..:|..|:.|.||:||.|||||:...|:.::|.|...:     ..:.|.:| .|.     .
Zfish   727 LDTEILYMMELIDPPLLHGEGGYYLTSAYGAMSLIKNFQEEQAARILSSATSDTLHQWHQRRTLQ 791

  Fly  1938 SCLPAC---SSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALFKLVDG 1999
            ..||:.   .:.:||.: .:.:.....:||.|||:.||.||||:.|.|.|:::|::|.||.|.|.
Zfish   792 RNLPSVDDFQNYMRVAL-QKADSGCTAKTLQVRPYATTEEVCRLCALKFRVSDPENYGLFLLTDE 855

  Fly  2000 EETLLTDAECPQ 2011
            ....|.....||
Zfish   856 SSQQLAADTHPQ 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:301589 25/96 (26%)
VPS9 1821..1922 CDD:280383 33/100 (33%)
UBQ 1946..2026 CDD:294102 25/66 (38%)
rin2bXP_017212050.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584031
Domainoid 1 1.000 77 1.000 Domainoid score I8754
eggNOG 1 0.900 - - E1_KOG2320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001291
OrthoInspector 1 1.000 - - otm25568
orthoMCL 1 0.900 - - OOG6_107356
Panther 1 1.100 - - O PTHR23101
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3144
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.770

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