DRSC/TRiP Functional Genomics Resources

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Protein Alignment spri and Rin3

DIOPT Version :9

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:XP_006240536.1 Gene:Rin3 / 314397 RGDID:1305849 Length:980 Species:Rattus norvegicus


Alignment Length:1393 Identity:276/1393 - (19%)
Similarity:433/1393 - (31%) Gaps:519/1393 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   678 AEGETSSEDDEEEPVEAEDEGEESSRDSSDNSPP--------C----DLGLMERLLVTHPMWFLP 730
            ||...|:......|...:.||||.  :..|...|        |    .:.::|:|:.|.|:|...
  Rat     4 AEAPASAHPAGPIPDAGKGEGEED--EEKDGMRPRLPTTPRNCIPHRGISVLEKLVKTCPVWLQL 66

  Fly   731 GIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLP--QDTGPYIEHYLIQSHDNVLSLESSRF 793
            ||.::.|..:||.:..|.|:|...|....:.:.|..|  ::|...:..|.|:...::|.||.|..
  Rat    67 GIGQAEAAKILQQEMAGMFLVCRDSSLKRLVLCVHFPSLKNTSTEVLEYPIKEEKSILYLEGSVL 131

  Fly   794 TFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKKLSSLALLGQEFWSYVSSPALLGPLTPSV 858
            .|..|..|||.|....|.||..|.||:.:.||::..:|.:::.||..||                
  Rat   132 VFEDIFRLIAFYCVSRDLLPFTLRLPQAILEASSFLELETISNLGLGFW---------------- 180

  Fly   859 APSKDQQLLDAKSPLSLTETSGLGTATFFSDTVSKPPPTGAPPLPGGGLFSPTGSGQLLGFFSQA 923
                |..|..::.|.....:|..||          |..:|.|                       
  Rat   181 ----DSSLNSSRGPAEPLRSSAPGT----------PASSGRP----------------------- 208

  Fly   924 GTPSDTTNSSLSSFTTSGGQHMQLLSPNSVDSVILTMSPVDNP-GHYLPGSTGAPMAPLCPSVVD 987
              .:...|.|.....:.|...:..::|..::...|...|...| |.|  .:..||.||...|:..
  Rat   209 --ATHLANCSCEIELSVGNDRLWFVNPIFIEDCTLPADPPPLPIGSY--PTRPAPAAPDATSLTS 269

  Fly   988 QQLSTFKVAQTAPEVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQNGSANGNFTVTTTVTFS 1052
            :.                .|:||.||      ||.|                    ||..|    
  Rat   270 KG----------------SPRRPPPP------PPVP--------------------TVPPT---- 288

  Fly  1053 MENGGGGGSGPTVGNGNGKFVEVTTPAASNPFNALLNGQASTFQTFAKRLSPEGECKDTLSSQGS 1117
                     ||.                                                     
  Rat   289 ---------GPA----------------------------------------------------- 291

  Fly  1118 SSNDSRWPPPARKLLTSPMTPLTPSGGSSSSGGKSRKSRAGKESQHYKESDILESPPMQYCASAL 1182
                  |||                                             :||:|      
  Rat   292 ------WPP---------------------------------------------APPVQ------ 299

  Fly  1183 SDKISDYEDVWSHDPSDRASLLTSFRPALDTVGGVMNRRPDLLAETPSTPTPTQQSHLTPCEEET 1247
                          |:|                           ..|::|||  .|||.|   ..
  Rat   300 --------------PAD---------------------------PLPNSPTP--NSHLAP---HA 318

  Fly  1248 TATPNESSSQSLLQFSGDVPARSRAGLLLPNLSGQVPPVAMTKSMT---------AAEDDGGDTT 1303
            ...|..|:.                           ||:...:|:.         ..|:....||
  Rat   319 PGPPGHSNQ---------------------------PPMTACESLPRPSVGLGPFGEEEMKPGTT 356

  Fly  1304 PTAEGQANGASRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGG 1368
            |               ||.:..|...|                              |||.    
  Rat   357 P---------------SPLHQAPPPPL------------------------------PLKK---- 372

  Fly  1369 SGNGAMLQPSDLEKLAGSLDELKPKPKVSQQ-QQQSQQQQQPTKRARNRIDHWQLDSSWEFMAKQ 1432
                             :|....|:.::|:: ..:||.....|.|.|:.|..             
  Rat   373 -----------------TLPAAPPRRRISERVSLESQNVGTSTDRDRSGISR------------- 407

  Fly  1433 DTGSHAGGDYDTAAIDW--QEKENSLG-RDSRADGQGKKRTLTIHQIIANRLPDLNLPELVRCST 1494
                       ||:::.  |...:||| |..|...||:               |.........||
  Rat   408 -----------TASLNLPPQSTVSSLGDRSPRTTEQGQ---------------DTEAKASHADST 446

  Fly  1495 P-PQTAALQPHVLGQDKAGVGCDGSQKSFQSQIGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSE 1558
            | |...|.||.|....|..|     .:...|.....|:|           .|.....:.......
  Rat   447 PVPPGKAKQPPVPPPRKKRV-----SRQLASTFPSPLTS-----------PIPEVSPEKPAAPGA 495

  Fly  1559 PWDSSQWDTFLPHDDATINSDTIHLSKCRPALSEDDTIVEELQSTKDGSNGSCNQDTLKANRNGA 1623
            ||:.     ..|...|.:....:..|.|..:..|....:..|..:......:.:||:...:   :
  Rat   496 PWEG-----LSPAGQAGMQHLQVQTSACPQSSPEFKGSLASLSDSLGVPASAADQDSYSTS---S 552

  Fly  1624 GHHKLNNGNGNGKANNRPKVATILRNPSMRDREVLCHPRNKMSIQS--------SGPGDSLRAYT 1680
            ...:|...:.|.|           :.|||    :|...|:::|..|        ......|....
  Rat   553 AEEELEFSSPNVK-----------KKPSM----ILDKARHRLSFASFTSVFHAFLSSDRKLYKKV 602

  Fly  1681 LQLAQDPSSTFARNIENFICCTKE--SREAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETA 1743
            ::||||..|.|...::::...:.|  :|:.:...:::.:|..|:.:|:||::..|.|...|    
  Rat   603 VELAQDKGSYFGSLVQDYKVYSLEMMTRQTSSTEMLQEIRTMMTQLKSYLLQSTELKALVE---- 663

  Fly  1744 RARLKSDEFLNLDAMLETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFG 1808
             ..|.|:|  .|:|::|:.:::.|:.||:|.:....::.:.|...:|.|.:|..........|.|
  Rat   664 -PTLHSEE--ELEAIVESALYKCVLKPLKEAINSSLLEIHSRDGSLQQLKENQLVILATTTTDLG 725

  Fly  1809 IRPTVTPPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFD--ATGCPRGQQLGADDFLPV 1871
            :  |.:.|..|.:..|...|..:.:|..|..|:.:.|.....::|  |.|.| |:..||||||||
  Rat   726 V--TTSVPEVAVMEKILQKLTNMHKAYSPGKKISILLKTCKLIYDSMALGNP-GKPYGADDFLPV 787

  Fly  1872 LVYVVAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTF--------MASEGES 1928
            |:||:|:.......:..|:|..|:.|.|..||..||||....|::.:|.:        ::.|.:.
  Rat   788 LMYVLARSNLTEMLLNVEYMMELMDPALQLGEGSYYLTTTYGALEHIKNYDKITVTRQLSVEVQD 852

  Fly  1929 GSGSLDWRSSCLPA-----------CSSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHK 1982
            .....:.|.:...|           |.|.|:   |::     |:|||..|..|..:.:|...|.|
  Rat   853 SIHRWERRRTLNKARASRSSVQDFICVSYLQ---PEQ-----QSRTLASRADTVAQALCAQCAEK 909

  Fly  1983 ARITNPQDYALFKLVDGEETLLTDAECP 2010
            ..:..||||.||.||||....|.|...|
  Rat   910 FEVAQPQDYRLFVLVDGRCFQLADEALP 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:301589 30/98 (31%)
VPS9 1821..1922 CDD:280383 36/110 (33%)
UBQ 1946..2026 CDD:294102 24/65 (37%)
Rin3XP_006240536.1 SH2_RIN3 52..153 CDD:198258 32/100 (32%)
VPS9 737..839 CDD:280383 36/102 (35%)
UBQ 888..958 CDD:294102 21/50 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343779
Domainoid 1 1.000 76 1.000 Domainoid score I8731
eggNOG 1 0.900 - - E1_KOG2320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I3221
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001291
OrthoInspector 1 1.000 - - otm46106
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23101
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2330
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.890

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