DRSC/TRiP Functional Genomics Resources

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Protein Alignment spri and vps901

DIOPT Version :9

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:NP_596110.2 Gene:vps901 / 2540886 PomBaseID:SPBC4F6.10 Length:571 Species:Schizosaccharomyces pombe


Alignment Length:427 Identity:84/427 - (19%)
Similarity:154/427 - (36%) Gaps:116/427 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1588 PALSEDDTIVEELQSTKDGSNGSCNQ--------DTLKANRNGAGHHKLNNG--------NGNGK 1636
            |:..||.|  ::..:..:...|..|:        |:|...||....|..|:.        |...:
pombe     4 PSFHEDPT--KDESTVAEQRKGQSNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQVRNMEDE 66

  Fly  1637 ANNRPKVATILRNPSMRDREVLCHPRNKMSIQSSGPGDSL------------------RAYTLQL 1683
            ||...      :..|..|:||:   ..|.|:......|::                  ..:..||
pombe    67 ANQYE------QTDSSSDQEVM---NEKQSLDKENRNDNIPHENNPGQQEINEPIFDFHMFLEQL 122

  Fly  1684 AQDPSSTFARNIENFIC-CTKESREAAPQV-VMRNMRQFMSGMKNYLVKHGEGKFHAELETARAR 1746
            ....:...|:.:::|:. .||.......|| ::|:..:|::...........|. .||::.|:  
pombe   123 RSSSAEPVAKYLKSFLSEFTKRRWTVNYQVKLIRDFLKFINEKIEQYEPWASGS-QAEIDNAK-- 184

  Fly  1747 LKSDEFLNLDAMLETVMHQLVV-----------LPL-REHLYGIFVDHYQRSEDIQLL----AQN 1795
                     :.|.:.|:::|..           :|| .||...:..|.. .||.::|.    .:|
pombe   185 ---------EGMEKLVLNRLYTSLFSPEIAKSGIPLSSEHSDDVEEDRV-LSEKMELFQWITEEN 239

  Fly  1796 VRYACEREAADFGIRPTVTPPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRG 1860
            :....::.::.|             .:|.|:.|.|:.:...|.||:...|.....:|...   |.
pombe   240 LDIKKQKSSSKF-------------FKLAADELRRINDYHAPRDKIICLLNCCKVIFSYL---RN 288

  Fly  1861 --QQLGADDFLPVLVYVVAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMA 1923
              ::..||.|:|:|::||.:..........:::.....|..|.||..|||:.|..|:..::|   
pombe   289 VVKEESADMFVPILIFVVLQARPAHLVSNIQYIQRFRSPEKLTGEVMYYLSTLMGAMSFIET--- 350

  Fly  1924 SEGESGSGSLDWRSSCLPACSSVLRVIIPDECNGSLQ 1960
                     ||        |||:  .|..:|.|..::
pombe   351 ---------LD--------CSSL--TITEEEFNAQIE 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:301589
VPS9 1821..1922 CDD:280383 27/102 (26%)
UBQ 1946..2026 CDD:294102 3/15 (20%)
vps901NP_596110.2 VPS9 252..352 CDD:280383 27/114 (24%)
CUE 529..571 CDD:214715
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23101
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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