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Protein Alignment spri and vps902
DIOPT Version :9
Sequence 1: | NP_001259418.1 |
Gene: | spri / 31987 |
FlyBaseID: | FBgn0085443 |
Length: | 2043 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001342780.1 |
Gene: | vps902 / 2540384 |
PomBaseID: | SPBC29A10.11c |
Length: | 402 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 136 |
Identity: | 32/136 - (23%) |
Similarity: | 56/136 - (41%) |
Gaps: | 40/136 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1821 LRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVY---------VV 1876
|..::...:.|.|...|..|:..|:.|.|::.:|:..|: ::|.||..|.:.:| ::
pombe 173 LHEVSEAFFALDEQHTPRSKINTFMTVNSSILNASQLPQ-EELNADSLLNLTIYCILCYPGFHLI 236
Fly 1877 AKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASEGESGSGSLDWRSSCLP 1941
:...||.....|:| |:||..|.||...:|: ||: |.
pombe 237 SHLNFVLRFRNADF---------LSGEQRYCLTTFEAAL----TFI-----------------LR 271
Fly 1942 ACSSVL 1947
||.::|
pombe 272 ACPNLL 277
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
spri | NP_001259418.1 |
SH2 |
716..813 |
CDD:301589 |
|
VPS9 |
1821..1922 |
CDD:280383 |
27/109 (25%) |
UBQ |
1946..2026 |
CDD:294102 |
1/2 (50%) |
vps902 | NP_001342780.1 |
VPS9 |
173..274 |
CDD:308039 |
30/131 (23%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23101 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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