DRSC/TRiP Functional Genomics Resources

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Protein Alignment spri and rin1b

DIOPT Version :9

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:XP_005166367.1 Gene:rin1b / 101882011 ZFINID:ZDB-GENE-121001-4 Length:722 Species:Danio rerio


Alignment Length:1380 Identity:228/1380 - (16%)
Similarity:347/1380 - (25%) Gaps:739/1380 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 DNSPPCDLGLMERLLVTHPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTG 771
            |.|....|.:::|||:||.:|....|....|..:||.:..|||:|...|..:...:.||: |:.|
Zfish     2 DASLQRSLSVLDRLLLTHSIWLQLSINPDSAHQILQREIVGTFLVCKCSASHRKVLCVRV-QEGG 65

  Fly   772 PYIEHYLIQSHDNVLSLESSRFTFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKKLSSLAL 836
              :..|.::..|:..|||||..:|..:..|:|.|....|.||..|.||..:.:|....:|.|::.
Zfish    66 --VSQYPVREEDSTFSLESSALSFPDLCRLVAFYTISRDVLPFPLELPEAIIQAVTHTQLESISH 128

  Fly   837 LGQEFWSYVSSPALLGPLTPSVAPSKDQQLLDAKSPLSLTETSGLGTATFFSDTVSKPPPTGAPP 901
            ||.||||..:||.|                                             |.|.||
Zfish   129 LGLEFWSSQTSPGL---------------------------------------------PNGPPP 148

  Fly   902 LPGGGLFSPTGSGQLLGFFSQAGTPSDTTNSSLSSFTTSGGQHMQLLSPNSVDSVILTMSPVDNP 966
                                    ||....:|            :|:||..|             
Zfish   149 ------------------------PSAPHRTS------------RLISPCFV------------- 164

  Fly   967 GHYLPGSTGAPMAPLCPSVVDQQLSTFKVAQTAPEVDQVRPQRPKPPNTLNLKPPAPPLRWSKPH 1031
                                                           |.|.|:||.|        
Zfish   165 -----------------------------------------------NPLFLQPPQP-------- 174

  Fly  1032 SPDQNGSANGNFTVTTTVTFSMENGGGGGSGPTVGNGNGKFVEVTTPAASNPFNALLNGQASTFQ 1096
                                                                             
Zfish   175 ----------------------------------------------------------------- 174

  Fly  1097 TFAKRLSPEGECKDTLSSQGSSSNDSRWPPPARKLLTSPMTPLTPSGGSS------SSGGKSRKS 1155
                             |:.:|....|:....| :..|..|.|:.|||.|      :.|..|.:.
Zfish   175 -----------------SRTASHKRHRFKRSLR-IRVSNETSLSLSGGESELNPGETHGQNSERR 221

  Fly  1156 RAGKESQHYKESDILESPPMQYCASALSDKISDYEDVWSHDPSDRASLLTSFRPALDTVGGVMNR 1220
            |.|..|                                                       |:.|
Zfish   222 RTGGLS-------------------------------------------------------VLRR 231

  Fly  1221 RPDLLAETPSTPTPTQQSHLTPCEEETTATPNESSSQSLLQFSGDVPARSRAGLLLPNLSGQVPP 1285
            .|.|        |||.:               |...|.|                     ||:||
Zfish   232 TPAL--------TPTSE---------------EEDEQML---------------------GQIPP 252

  Fly  1286 VAMTKSMTAAEDDGGDTTPTAEGQANGASRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQ 1350
                                                                             
Zfish   253 ----------------------------------------------------------------- 252

  Fly  1351 MLHASQRHSEPLKAGFGGSGNGAMLQPSDLEKLAGSLDELKPKPKVSQQQQQSQQQQQPTKRARN 1415
                                             :.||.:|...|:                    
Zfish   253 ---------------------------------SNSLPQLNKDPE-------------------- 264

  Fly  1416 RIDHWQLDSSWEFMAKQDTGSHAGGDYDTAAIDWQEKENSLGRDSRADGQ---GKKRTLTIHQII 1477
                                                           ||:   ..:||       
Zfish   265 -----------------------------------------------DGEVCLALERT------- 275

  Fly  1478 ANRLPDLNLPELVRCSTPPQTAALQPHVLGQDKAGVGCDGSQKSFQSQIGCRLSSYDNVFCQNSF 1542
              |.|.|                                                          
Zfish   276 --RAPSL---------------------------------------------------------- 280

  Fly  1543 GGIDSAQSDDGTIFSEPWDSSQWDTFLPHDDATINSDTIHLSKCRPALSEDDTIVEELQSTKDGS 1607
                 |:.|..:.||                               :|.|:||.|:         
Zfish   281 -----AELDSNSSFS-------------------------------SLEEEDTQVD--------- 300

  Fly  1608 NGSCNQDTLKANRNGAGHHKLNNGNGNGKANNRPKVATILRNPSMRDREVLCHPRNKMSIQSSGP 1672
                                        .|:..|..|...|.|                  |:.|
Zfish   301 ----------------------------LAHQWPPAARGTRFP------------------SANP 319

  Fly  1673 GDSLRAYTL-----------------QLAQDPSSTFARNIENFICCTKESREAAPQ----VVMRN 1716
            ..:||..|.                 :|::|..|||...:::|:...::..||:..    .:::.
Zfish   320 TSTLRRMTAAFVCVFAPERRVARLVDELSRDRRSTFGSLVQDFLEKKRQEMEASVHSSAVEMLQG 384

  Fly  1717 MRQFMSGMKNYLVKHGEGKFHAELETARARLKSDEFLNLDAMLETVMHQLVVLPLREHLYGIFVD 1781
            ||:|::..|:.|::.||  ....:||.   :..:|   .|..||..:...|:.||:..|....|.
Zfish   385 MRRFLTQAKSLLLEAGE--IEPPIETL---VPENE---KDLALEKALFGCVLKPLKVQLQQTLVS 441

  Fly  1782 HYQRSEDIQLLAQNV----RYACEREAADFGIRPTVTPPSQAALRLIANLLWRLQEAELPLDKLE 1842
            .:.|...:|.:.:::    ..|.||.|...|:. .|....:|..:|:.     :|.:..|:||:.
Zfish   442 LHTRDGSLQRVTESLLAHQEGALERLAVRVGVL-DVRGVERAKAKLML-----MQRSHSPIDKVL 500

  Fly  1843 LFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYY 1907
            |.|.|..:|:.|.|...||.:|:|||||.|.||:.:|......:|.|:|..||:|:.|.||.|||
Zfish   501 LLLQVCKSVYKAMGTQPGQDVGSDDFLPALSYVLIQCNIPQLLLETEYMMELLEPSWLTGEGGYY 565

  Fly  1908 LT----ALC----------------SAVQVLKTFMASEGESGSGSLDWRSSCLPACSSVLRVIIP 1952
            ||    :||                .|.:.|:.:....|:......|.:..     ...:|::..
Zfish   566 LTSVYASLCLIQSKPGTTPTSGLTNEAQEYLREWSRRRGQEAKTHKDTQLK-----QRFVRILFQ 625

  Fly  1953 DECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALFKLVDGEETLLTDAECPQDARLAA 2017
            ||....:  |||..:.......:.:..|....::.||.|.||...:||...|     |...:...
Zfish   626 DEIRSGV--RTLLWKAGENVDALAQSCAALFGVSEPQHYCLFWRNEGEMRPL-----PAHVQPHQ 683

  Fly  2018 KGKH--CMLAYKRID 2030
            .|.|  ..|:|.|.|
Zfish   684 LGTHEGASLSYLRSD 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:301589 31/96 (32%)
VPS9 1821..1922 CDD:280383 41/120 (34%)
UBQ 1946..2026 CDD:294102 19/81 (23%)
rin1bXP_005166367.1 SH2 11..106 CDD:301589 32/97 (33%)
VPS9 479..578 CDD:302927 40/103 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584038
Domainoid 1 1.000 77 1.000 Domainoid score I8754
eggNOG 1 0.900 - - E1_KOG2320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001291
OrthoInspector 1 1.000 - - otm25568
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23101
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.840

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