DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spri and rin2

DIOPT Version :9

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:XP_012818164.1 Gene:rin2 / 100144744 XenbaseID:XB-GENE-484799 Length:881 Species:Xenopus tropicalis


Alignment Length:1396 Identity:274/1396 - (19%)
Similarity:412/1396 - (29%) Gaps:597/1396 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   658 RDELSQSRTSLVSSSEGGILAEGETSSEDDEEEPVEAEDEGEESSRDSSDNSPPCDLGLMERLLV 722
            |||.|..|           |:..|..|....|     :.|.:...|||...|....|.::::||.
 Frog    40 RDEESTDR-----------LSRKEMESNHSPE-----KKEVKSFLRDSGYESVSFKLSILDKLLH 88

  Fly   723 THPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTGPYIEHYLIQSHDNVLS 787
            |||:|...|:.......:|..:...||:||.|::.....:|||:|.....:.:.::|:......|
 Frog    89 THPVWLQLGLSDDKVPGILLEQPPATFLVRKSNKLQKKVISVRMPNQFASHFQEFVIKESSYTFS 153

  Fly   788 LESSRFTFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKKLSSLALLGQEFWSYVSSPALLG 852
            ||.|..:|..|..|||.|....|.||..|.||..:..|....:|..:|.||.|||   ||||...
 Frog   154 LEGSGISFADIFRLIAFYCISRDVLPFTLKLPHAIATAKTEAELEEIAQLGTEFW---SSPANCK 215

  Fly   853 PLTPSVAPSKDQQLLDAKSPLSLTETSGLGTATFFSDTVSKPPPTGAPPLPGGGLFSPTGSGQLL 917
            |..|...                                       |.||               
 Frog   216 PRYPHAV---------------------------------------AWPL--------------- 226

  Fly   918 GFFSQAGTPSDTTNSSLSSFTTSGGQHMQLLSPNSVDSVILTMSPVDNPGHYLPGSTGAPMAPLC 982
                    |||..|.          :..||...|.|.| :.|.:|                    
 Frog   227 --------PSDCLNK----------ESPQLPRLNGVHS-LRTRTP-------------------- 252

  Fly   983 PSVVDQQLSTFKVAQTAPEVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQNGSANGNFTVTT 1047
                    |..:.:||...:..:.|                  .:.|.||               
 Frog   253 --------SELECSQTKGALCFINP------------------LFLKVHS--------------- 276

  Fly  1048 TVTFSMENGGGGGSGPTVGNGNGKFVEVTTPAASNPFNALLNGQASTFQTFAKRLSPEGECKDTL 1112
                  |:.|||.                                       ||.|.  ..::|.
 Frog   277 ------EDAGGGW---------------------------------------KREST--RTQETN 294

  Fly  1113 SSQGSSSNDSRWPPPARKLLTSPMTPLTPSGGSSSSGGKSRKSRAGKESQHYKESDILESPPMQY 1177
            .::...|...|.|||.   :||..|.|             :.|||.|:     ||.:.|      
 Frog   295 GTERVKSAPPRPPPPC---ITSHRTNL-------------QLSRAVKQ-----ESSMPE------ 332

  Fly  1178 CASALSDKISDYEDVWSHDPSDRASLLTSFRPALDTVGGVMNRRPDLLAETPSTPTPTQQSHLTP 1242
                                       |.|.          ||...  ||.|:            
 Frog   333 ---------------------------TVFH----------NREGK--AEAPN------------ 346

  Fly  1243 CEEETTATPNESSSQSLLQFSGDVPARSRAGLLLPNLSGQVPPVAMTKSMTAAEDDGGDTTPTAE 1307
                ..|||                               :||..:.|..|.:...|.|::    
 Frog   347 ----NKATP-------------------------------IPPPRLKKQATISRWQGNDSS---- 372

  Fly  1308 GQANGASRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGGSGNG 1372
                        |||                          |....:|...|:|           
 Frog   373 ------------SPF--------------------------SGSYCSSSVESQP----------- 388

  Fly  1373 AMLQPSDLEKLAGSLDELKPKPKVSQQQQQSQQQQQPTKRARNRIDHWQLDSSWEFMAKQDTGSH 1437
                            |..|..|..|...::|....|.:..                        
 Frog   389 ----------------EESPPQKTIQSLTRAQNSDSPARTT------------------------ 413

  Fly  1438 AGGDYDTAAIDWQEKENSLGRDSRADGQGKKRTLTIHQIIANRLPDLNLPELVRCSTPPQTAALQ 1502
                                                  ::..||.|:::      ||        
 Frog   414 --------------------------------------LLTQRLSDMSI------ST-------- 426

  Fly  1503 PHVLGQDKAGVGCDGSQKSFQSQIGCRLSSYD---NVFCQNSFGGIDSAQSDDGTIFSEPWDSSQ 1564
                          .|..||:         ||   .|||:.                    ||  
 Frog   427 --------------SSSDSFE---------YDRPGQVFCEG--------------------DS-- 446

  Fly  1565 WDTFLPHDDATINSDTIHLSKCRPALSEDDTIVEELQSTKDGSNGSCNQDTLKANRNGAGHHKLN 1629
                              |..|            |.:|.::|.:....  :.|......|..|: 
 Frog   447 ------------------LEDC------------EEESDQEGMSPPIK--SRKKRGTSLGFSKI- 478

  Fly  1630 NGNGNGKANNRPKVATILRNPSMRDREVLCHPRNKMSIQSSGPGDSLRAYTLQLAQDPSSTFARN 1694
                         |.|.||..|.....::. |..||..:.:......|.|...|.||..|....|
 Frog   479 -------------VKTHLRKVSGVFSSLIT-PEKKMVKKIATMSRDKRTYFGCLVQDYISFLQEN 529

  Fly  1695 IENFICCTKESREAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETARARLKSDEFLNLDAML 1759
            .|..:..|.         ::..:||||:.:||||.:      .:||:.....|..::  .:|.:|
 Frog   530 KECHVSSTD---------MLHTIRQFMTQVKNYLAQ------SSELDPPIESLIPED--QIDVVL 577

  Fly  1760 ETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGIRPTVTPPSQAALRLI 1824
            |..||:.::.||:.|:..:..:........:.|.:|::...:|...:.|:. |.||.|....::.
 Frog   578 EKAMHKCILKPLKSHIESMLKEFRVADGSWRQLKENLQLVRQRSPQELGVL-TPTPESMDIEKMR 641

  Fly  1825 ANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAKCGFVGAEIEAE 1889
            ...| .:|:...|..|:.|.|.|...::.......|:..|||||||||.||:|:|..:..:.|.|
 Frog   642 IKFL-NMQKMYSPERKVMLLLRVCKLIYTCMENNSGRMYGADDFLPVLTYVIAQCDMLEIDTEIE 705

  Fly  1890 FMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASE------GESGSGSLDWR-----SSCLPAC 1943
            :|..||.|.||:||.|||||:...|:.::|.|...:      .|:......|.     :..:|:.
 Frog   706 YMMELLDPALLHGEGGYYLTSAYGALSLIKNFQEEQAARLLNSETRDTLKQWHKRRTTNRSIPSI 770

  Fly  1944 ---SSVLRVIIPDE---CNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALFKLVDGEET 2002
               .:.|||.:.:.   |.|    :||.|:|:|||.:||.:.|.:..|.:|::|.||..:|....
 Frog   771 DDFQNYLRVALQEADSGCTG----KTLIVKPYTTTEDVCHMCAKRFGIQDPENYGLFLYIDDTWQ 831

  Fly  2003 LLTDAECPQDARLAAKGKHCM----LAYKRI 2029
            .|::...||..:.....:..:    ..||||
 Frog   832 QLSEDTYPQKIKAELHSRPQLQVFHFVYKRI 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:301589 29/96 (30%)
VPS9 1821..1922 CDD:280383 38/100 (38%)
UBQ 1946..2026 CDD:294102 24/86 (28%)
rin2XP_012818164.1 SH2_RIN2 82..181 CDD:198257 31/98 (32%)
VPS9 636..752 CDD:128469 40/116 (34%)
RA_Rin2 773..863 CDD:340548 28/94 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8786
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 233 1.000 Inparanoid score I3334
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001291
OrthoInspector 1 1.000 - - otm49188
Panther 1 1.100 - - O PTHR23101
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3144
SonicParanoid 1 1.000 - - X2330
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.090

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