DRSC/TRiP Functional Genomics Resources

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Protein Alignment spri and rin3

DIOPT Version :10

Sequence 1:NP_001259418.1 Gene:spri / 31987 FlyBaseID:FBgn0085443 Length:2043 Species:Drosophila melanogaster
Sequence 2:XP_002933252.2 Gene:rin3 / 100038102 XenbaseID:XB-GENE-488895 Length:1035 Species:Xenopus tropicalis


Alignment Length:1383 Identity:271/1383 - (19%)
Similarity:458/1383 - (33%) Gaps:429/1383 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   670 SSSEGGILAEGETSSEDDEEEPVEAEDEGEESSRDSSDNSPPCDLGLMERLLVTHPMWFLPGIQR 734
            |.:..|:.|....|...|..:|   |..|.|     ::...|..:.:::||:.|.|:|....:..
 Frog     4 SGTSAGMEAAARDSCPADVGDP---EKHGTE-----NNCHVPSGISVLDRLIKTCPVWLQLCMNP 60

  Fly   735 SGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTGPY-IEHYLIQSHDNVLSLESSRFTFGSI 798
            ..||.:|:.:..|.|::....:...|.:.|.:..:.... :..|.|:....::.||||...|..|
 Frog    61 EQAVDILKKEGPGVFLITRDVERKCMVLWVHVTSNKEQADVLRYNIKEEKTMMYLESSVLVFEDI 125

  Fly   799 PSLIAHYAQCCDELPVQLMLPRVLREANNRKKLSSLALLGQEFWSYVSSPALLGPLTPSVAPSKD 863
            ..|:|.|....|.||..|.||:.:..|...|:|.:.:.||..||.                    
 Frog   126 FKLVAFYCVSRDVLPFPLKLPQAIAAAQTYKELETFSNLGTGFWD-------------------- 170

  Fly   864 QQLLDAKSPLSLTETSGLGTATFFSDTVSKPPPTGAPPLPGGGLFSPTGSGQLLGFFSQAGTPSD 928
                     .:.|:.:.|..|.....|                   ..|..|.....|.....::
 Frog   171 ---------SAFTDGNKLAAAKQHRCT-------------------SNGDFQTCSVRSSHHIQNE 207

  Fly   929 TTNSSLSSFTTSGGQHMQLLSPNSVDSVILTMSPVDNPGHYLPGSTGAPMAPLCPSVVDQQLSTF 993
            ..|.:.....:.|...:..:||..::.....::              |...||...|.:.::.|.
 Frog   208 ANNCTCEIEISVGSGRLWFVSPIFIEECSNVLA--------------AEKLPLLNCVANSEIKTH 258

  Fly   994 KVAQTAPEVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQNGSANGNFTVTTTVTFSMENGGG 1058
            |:..          :||.||      ||.||                                  
 Frog   259 KIVY----------RRPPPP------PPPPP---------------------------------- 273

  Fly  1059 GGSGPTVGNGNGKFVEVTTPAASNPFNALLNGQASTFQTFAKRLSPEGECKDTLSSQGSSSNDSR 1123
                               ||..||                                        
 Frog   274 -------------------PALKNP---------------------------------------- 279

  Fly  1124 WPPPARKLLTSPMTPLTPSGGSSSSGGKSRKSRAGKESQHYKESDILESPPMQYCASALSDKISD 1188
                       |:..:.|||...:.          |.|..|........||....|..||..:..
 Frog   280 -----------PLPSVPPSGPPPNY----------KRSHSYTSPQKSPRPPSFSVAPPLSCLLHS 323

  Fly  1189 YEDVWSHDPSDRASLLTSFRPALDTVGGVMNRRPDLLAETPSTPTPTQQSHLTPCEEETTATPNE 1253
            .    |:.|...:..|||..|.:.       :.|      ||:.||....  ||        |..
 Frog   324 S----SNQPMTPSLSLTSHAPCVP-------QNP------PSSNTPIVSQ--TP--------PLS 361

  Fly  1254 SSSQSLLQFSGDVPARSRAGLLLPNLSGQVPPVAMT---KSMTAAED--DGGDTTPTAEGQANGA 1313
            ..||:|.|.. |:|..|      .::..:|.|:|.:   ..:.:.||  |..:....:.|:.|  
 Frog   362 QMSQNLSQLK-DLPNTS------TDICVEVQPLAQSCEEMKINSTEDKKDSVEYAICSSGEQN-- 417

  Fly  1314 SRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGGSGNGAMLQPS 1378
                              |....||.....|||        |.:.||       ..||       
 Frog   418 ------------------QKSAMSAPVVPKRRQ--------SGKISE-------NKGN------- 442

  Fly  1379 DLEKLAGSLDELKPKPKVSQQQQQSQQQQQPTKR--ARNRIDHWQLDSSWEFMAKQDTGSHAGGD 1441
                      .::.|..:.|.::||.|..:...:  |...::|..:     .:.|:|        
 Frog   443 ----------SVRKKELLQQTERQSTQSVKSVSKDQAETHLNHETI-----MLIKKD-------- 484

  Fly  1442 YDTAAIDWQEKE-NSLGRDSRADGQGKKRTLTIHQIIANRLPDLNLPELVRCSTPPQTAALQPHV 1505
                 |:..|:: .|.|:.::.......||......:|..||..|....|:        .|:...
 Frog   485 -----IETLEQQCISQGKRNKTPPVPPPRTKKFSHRVAPALPGQNSHSPVK--------ELRSRT 536

  Fly  1506 LGQDKAGVGCDGSQKSFQSQIGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPWDSSQWDTFLP 1570
            ...|......|..|....||..|  |.|.: |.:|                .||.      |.||
 Frog   537 QSSDYKAKCSDVKQNGRTSQSDC--SKYKD-FAKN----------------KEPC------TRLP 576

  Fly  1571 HD-----DATINSDTIHLSKCRPALS-EDDTIVEELQSTKDGSNGSCNQDTLKANRNGAGHHKLN 1629
            ..     |.:::|....|:  .|..| |.|::          |..|..:|        ..|.|::
 Frog   577 TKELKSLDTSLSSPASGLT--IPVTSPEQDSL----------STSSAEED--------HDHEKVS 621

  Fly  1630 NGNGNGKANNRPKVATILRNPSMRDRE--VLCHPRNKMSIQS--------SGPGDSLRAYTLQLA 1684
                               :||:|...  :|...:|::||.:        ......|:....:||
 Frog   622 -------------------SPSIRKTHSFMLDRAKNRLSIVTITNVFSAFMSAERKLQKKITELA 667

  Fly  1685 QDPSSTFARNIENFICCTKE--SREAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETARARL 1747
            ||..:.|...::::...:.:  :::::...:::.:|..|:.:|:|||:..|.|...|..|    :
 Frog   668 QDKETYFGNLVQDYKAYSLDMMAKQSSSTEMLQEIRLMMTQLKSYLVQSAELKTMIESTT----V 728

  Fly  1748 KSDEFLNLDAMLETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGIRPT 1812
            .:|:  .::|::|..:.:.|:.||:..:.|...:.:.:...::||.:|.....:....|.|:  |
 Frog   729 YTDD--RIEAIVEAALCKCVLKPLKSPIEGYLREIHTKDGSLRLLKENQIVIQDITTTDLGV--T 789

  Fly  1813 VTPPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFD--ATGCPRGQQLGADDFLPVLVYV 1875
            .:.|..:.:..|......:.:...|..|:...|.....::|  |||.| |:..|||||||||:||
 Frog   790 TSVPEISVMEKITQKFSVMHKTYSPEKKVSYLLKACKMIYDSMATGSP-GKLHGADDFLPVLMYV 853

  Fly  1876 VAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTF--------MASEGESGSGS 1932
            :|:|.......:.|:|..|:.|.|..||..||||....|::.:|.:        ::.|.:.....
 Frog   854 LARCDLTELLQDVEYMMELMDPALQLGEGSYYLTTTYGALEHIKNYDKITVTRQLSVEVQDSIHR 918

  Fly  1933 LDWRSSCLPACSSVLRVIIPDECNGSLQ-----TRTLPVRPHTTTREVCRIIAHKARITNPQDYA 1992
            .:.|.:...|  .|.|..|.|....|.:     :|||.::|.|....:.:..|.|.::..||:|.
 Frog   919 WERRRTLNKA--RVSRSSIQDFITISFEELDSKSRTLVIKPDTNVELLLQDCAEKFQVLEPQNYG 981

  Fly  1993 LFKLVDGEETLLTDAECP 2010
            |:..|:.....|.|...|
 Frog   982 LYVQVNERSLRLADDALP 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spriNP_001259418.1 SH2 716..813 CDD:472789 24/97 (25%)
VPS9 1824..1922 CDD:460489 36/107 (34%)
RA_Rin 1946..2030 CDD:340474 20/70 (29%)
rin3XP_002933252.2 SH2_RIN3 42..142 CDD:198258 26/99 (26%)
VPS9 798..901 CDD:460489 36/103 (35%)
RA_Rin3 936..1023 CDD:340547 17/64 (27%)

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