DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32687 and RLP38

DIOPT Version :9

Sequence 1:NP_001259412.1 Gene:CG32687 / 31980 FlyBaseID:FBgn0052687 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_188953.1 Gene:RLP38 / 821887 AraportID:AT3G23120 Length:784 Species:Arabidopsis thaliana


Alignment Length:350 Identity:96/350 - (27%)
Similarity:150/350 - (42%) Gaps:78/350 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DLVTLEDHLASPQKALLKSSGDIETM-------LLNHNRLVGLPRLLLQFGNLKILDLSSN-AIT 83
            ::::|:.:..|.....||||..:..:       |.|.|....:|..:....:|..||||:| .:.
plant    84 EVISLKLYFLSTASTSLKSSSALFKLQHLTHLDLSNCNLQGEIPSSIENLSHLTHLDLSTNHLVG 148

  Fly    84 TLPDAVCQLPLVTLI------AKNNLLTN-ASLPK-SLLTKMANGNGNGNATGG----TNST-LK 135
            .:|.::..|..:..|      .:.|:.|: |:|.| |||....|     |.|||    :|.| |.
plant   149 EVPASIGNLNQLEYIDLRGNHLRGNIPTSFANLTKLSLLDLHEN-----NFTGGDIVLSNLTSLA 208

  Fly   136 ELNLSGNQL-THFPEQVTELRHLKYLYLGGNKISSVS---KDIWKMQSLHVLSLGGNLISEVPEA 196
            .|:||.|.. :.|...::.|.:|:.::  ||:.|.|.   ..:.|:.||..:.|..|.. |.|..
plant   209 ILDLSSNHFKSFFSADLSGLHNLEQIF--GNENSFVGLFPASLLKISSLDKIQLSQNQF-EGPID 270

  Fly   197 VGSLNQLQALVLCD----NLIEILPTSIARLKNLKSLLLHKNRLRHL-PKDIVALKNLTELSLRD 256
            .|:.:....|.:.|    |.|..:|:|:::|.||:.|.|..|..|.| |:.|..|.|||.|.:..
plant   271 FGNTSSSSRLTMLDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSISKLVNLTSLDISY 335

  Fly   257 NPL---VVRFV------QDMALKPPTLLELAGRMVK------------ASGQRPGPYDIPRTLAE 300
            |.|   |..|:      |.:.|...:..:| |:.|:            .|....||  ||:.:. 
plant   336 NKLEGQVPYFIWKPSNLQSVDLSHNSFFDL-GKSVEVVNGAKLVGLNLGSNSLQGP--IPQWIC- 396

  Fly   301 YLNSANCCVNPNCKGVFF----DNR 321
                       |.:.|||    |||
plant   397 -----------NFRFVFFLDLSDNR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32687NP_001259412.1 leucine-rich repeat 72..92 CDD:275380 7/20 (35%)
leucine-rich repeat 94..133 CDD:275380 15/50 (30%)
LRR_8 132..190 CDD:290566 18/62 (29%)
LRR_4 134..171 CDD:289563 11/37 (30%)
leucine-rich repeat 134..156 CDD:275380 7/22 (32%)
leucine-rich repeat 157..179 CDD:275380 6/24 (25%)
leucine-rich repeat 180..202 CDD:275380 6/21 (29%)
LRR_8 202..259 CDD:290566 22/61 (36%)
leucine-rich repeat 203..225 CDD:275380 7/25 (28%)
leucine-rich repeat 226..248 CDD:275380 9/22 (41%)
RLP38NP_188953.1 PLN00113 11..>721 CDD:331614 95/349 (27%)
leucine-rich repeat 112..135 CDD:275380 4/22 (18%)
leucine-rich repeat 136..159 CDD:275380 8/22 (36%)
leucine-rich repeat 160..183 CDD:275380 5/22 (23%)
leucine-rich repeat 184..206 CDD:275380 9/26 (35%)
leucine-rich repeat 207..254 CDD:275380 13/48 (27%)
leucine-rich repeat 255..276 CDD:275380 6/21 (29%)
leucine-rich repeat 280..303 CDD:275380 7/22 (32%)
leucine-rich repeat 304..327 CDD:275380 9/22 (41%)
leucine-rich repeat 352..376 CDD:275380 5/24 (21%)
leucine-rich repeat 377..397 CDD:275380 5/33 (15%)
leucine-rich repeat 401..424 CDD:275380 5/9 (56%)
leucine-rich repeat 425..448 CDD:275380
leucine-rich repeat 449..472 CDD:275380
leucine-rich repeat 473..496 CDD:275380
leucine-rich repeat 523..545 CDD:275380
leucine-rich repeat 659..682 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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