DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32687 and Lrrc39

DIOPT Version :9

Sequence 1:NP_001259412.1 Gene:CG32687 / 31980 FlyBaseID:FBgn0052687 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001103107.1 Gene:Lrrc39 / 691307 RGDID:1585106 Length:334 Species:Rattus norvegicus


Alignment Length:261 Identity:70/261 - (26%)
Similarity:134/261 - (51%) Gaps:22/261 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEVYTSDSSDTDSREQKTLDFGRMSLDLVTLEDHLASPQKALLKSSGDIETMLLNHNRLVGLPRL 65
            :.::....|.|..:|:.|.:.||:.| .:..|:....| .:|||.: .::...|:...|:.:|..
  Rat    40 VRIWEDRVSLTKLKEKVTREDGRIIL-RIEKEEWKTLP-SSLLKLN-QLQEWQLHRTGLLKIPEF 101

  Fly    66 LLQFGNLKILDLSSNAITTLPDAVCQLP-LVTLIAKNNLLTNASLPKSLLTKMANGNGNGNATGG 129
            :.:|.:|.:||||.|.|:.:|..:..|. |..||...|.:  .::||.|               .
  Rat   102 IGRFQHLIVLDLSRNTISEIPRGIGLLTRLQELILSYNKI--KTVPKEL---------------S 149

  Fly   130 TNSTLKELNLSGNQ-LTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSLHVLSLGGNLISEV 193
            ..::|::|.|:.|: ::..|.::::|..|.:|.|..|:.:::...:..|.:|..|.:|.|.:.::
  Rat   150 NCASLEKLELAVNRDISDLPTELSKLLKLTHLDLSMNQFTTIPLAVLDMPALEWLDMGSNSLQQL 214

  Fly   194 PEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNP 258
            |:.:..:..|..|.|..|.|..||.:|..:|||.:|:|..|:|:.:|..:..:.:|..::.||||
  Rat   215 PDTLDRMQSLHTLWLQRNEITCLPETIRNMKNLGTLVLSNNKLQDIPGCMEEMTSLRFVNFRDNP 279

  Fly   259 L 259
            |
  Rat   280 L 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32687NP_001259412.1 leucine-rich repeat 72..92 CDD:275380 8/19 (42%)
leucine-rich repeat 94..133 CDD:275380 7/38 (18%)
LRR_8 132..190 CDD:290566 15/58 (26%)
LRR_4 134..171 CDD:289563 10/37 (27%)
leucine-rich repeat 134..156 CDD:275380 6/22 (27%)
leucine-rich repeat 157..179 CDD:275380 5/21 (24%)
leucine-rich repeat 180..202 CDD:275380 5/21 (24%)
LRR_8 202..259 CDD:290566 20/56 (36%)
leucine-rich repeat 203..225 CDD:275380 8/21 (38%)
leucine-rich repeat 226..248 CDD:275380 6/21 (29%)
Lrrc39NP_001103107.1 LRR 41..>286 CDD:227223 70/260 (27%)
LRR 1. /evidence=ECO:0000255 59..82 7/24 (29%)
LRR 2. /evidence=ECO:0000255 83..105 3/22 (14%)
leucine-rich repeat 85..107 CDD:275380 4/21 (19%)
LRR 3. /evidence=ECO:0000255 106..128 8/21 (38%)
leucine-rich repeat 108..127 CDD:275380 8/18 (44%)
LRR 4. /evidence=ECO:0000255 129..151 7/38 (18%)
leucine-rich repeat 131..153 CDD:275380 7/38 (18%)
LRR 5. /evidence=ECO:0000255 153..175 5/21 (24%)
leucine-rich repeat 154..177 CDD:275380 6/22 (27%)
LRR 6. /evidence=ECO:0000255 176..198 4/21 (19%)
leucine-rich repeat 178..200 CDD:275380 5/21 (24%)
LRR 7. /evidence=ECO:0000255 199..221 5/21 (24%)
leucine-rich repeat 201..223 CDD:275380 5/21 (24%)
LRR 8. /evidence=ECO:0000255 223..244 8/20 (40%)
leucine-rich repeat 224..246 CDD:275380 8/21 (38%)
LRR 9. /evidence=ECO:0000255 245..269 8/23 (35%)
leucine-rich repeat 247..269 CDD:275380 6/21 (29%)
LRR 10. /evidence=ECO:0000255 272..295 5/9 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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