DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32687 and Lrrc58

DIOPT Version :9

Sequence 1:NP_001259412.1 Gene:CG32687 / 31980 FlyBaseID:FBgn0052687 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001182487.1 Gene:Lrrc58 / 303919 RGDID:1307440 Length:366 Species:Rattus norvegicus


Alignment Length:378 Identity:165/378 - (43%)
Similarity:223/378 - (58%) Gaps:41/378 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LDFGRMSLDLVTLEDHLAS-------PQKALLKSSGDIETMLLNHNRLVGLPRLL-LQFGNLKIL 75
            |::.|:|:....||..|.:       .::|||:       :||.:|||..|||.| ..|.:|::|
  Rat    11 LNWSRLSVSAEALESELEARAEERRGSREALLR-------LLLPYNRLTSLPRALGSGFPHLQLL 68

  Fly    76 DLSSNAITTL-PDAVCQLPLVTLIAKNNLLTN-ASLPKSLLTKMANGNGNGNATGGTN---STLK 135
            |:|.||:|.| |:.:....|.||:|:||.|.. .||||.|               |.:   .:|:
  Rat    69 DVSGNALTALGPELLTLSGLRTLLARNNRLGGPGSLPKGL---------------GQSPLCRSLQ 118

  Fly   136 ELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSLHVLSLGGNLISEVPEAVGSL 200
            .||||||.....|..:.|||.|:.|.||||::.|:..:|..:|||..|.||||.|.|:|..:.:|
  Rat   119 VLNLSGNCFQELPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELANL 183

  Fly   201 NQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQ 265
            ..|..||||||.|:.:|..:::|.:|:||.||.|.|.:||::|:.|.:|.|||||.||||||||:
  Rat   184 PSLNYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVR 248

  Fly   266 DMALKPPTLLELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDF 330
            |:...||||||||.|.:|.......|||:|..|..||.||:.|.||.|.||:||..|..||||||
  Rat   249 DLTYDPPTLLELAARTIKIRSISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDF 313

  Fly   331 CGKYRVPLLQYLCSSKCIEPEQPAARGSSVPAASAS------SGFMMRKVLLG 377
            |||||:||:.||||.:|..|...|:..|:..:.|.|      :...|:|||||
  Rat   314 CGKYRLPLMHYLCSPECSSPCSSASHSSTSQSESDSEDEASVAAHRMQKVLLG 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32687NP_001259412.1 leucine-rich repeat 72..92 CDD:275380 9/20 (45%)
leucine-rich repeat 94..133 CDD:275380 13/42 (31%)
LRR_8 132..190 CDD:290566 27/57 (47%)
LRR_4 134..171 CDD:289563 18/36 (50%)
leucine-rich repeat 134..156 CDD:275380 10/21 (48%)
leucine-rich repeat 157..179 CDD:275380 8/21 (38%)
leucine-rich repeat 180..202 CDD:275380 10/21 (48%)
LRR_8 202..259 CDD:290566 28/56 (50%)
leucine-rich repeat 203..225 CDD:275380 10/21 (48%)
leucine-rich repeat 226..248 CDD:275380 11/21 (52%)
Lrrc58NP_001182487.1 LRR <41..>242 CDD:227223 93/222 (42%)
leucine-rich repeat 41..64 CDD:275380 12/29 (41%)
leucine-rich repeat 65..87 CDD:275380 9/21 (43%)
leucine-rich repeat 88..116 CDD:275380 13/42 (31%)
leucine-rich repeat 117..139 CDD:275380 10/21 (48%)
leucine-rich repeat 140..162 CDD:275380 8/21 (38%)
leucine-rich repeat 163..185 CDD:275380 10/21 (48%)
leucine-rich repeat 186..208 CDD:275380 10/21 (48%)
leucine-rich repeat 209..231 CDD:275380 11/21 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340593
Domainoid 1 1.000 121 1.000 Domainoid score I5596
eggNOG 1 0.900 - - E33208_3BCFH
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H14598
Inparanoid 1 1.050 269 1.000 Inparanoid score I2945
OMA 1 1.010 - - QHG52401
OrthoDB 1 1.010 - - D382000at33208
OrthoFinder 1 1.000 - - FOG0005500
OrthoInspector 1 1.000 - - oto96457
orthoMCL 1 0.900 - - OOG6_106090
Panther 1 1.100 - - LDO PTHR45752
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3919
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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