DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32687 and Y42G9A.3

DIOPT Version :9

Sequence 1:NP_001259412.1 Gene:CG32687 / 31980 FlyBaseID:FBgn0052687 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001022864.1 Gene:Y42G9A.3 / 175865 WormBaseID:WBGene00021533 Length:375 Species:Caenorhabditis elegans


Alignment Length:386 Identity:158/386 - (40%)
Similarity:227/386 - (58%) Gaps:45/386 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VYTSDSSDTDSREQKTLDFGRMSLDLVTLEDHLASPQKALLKSSGDIETMLLNHNRLVGLPRLLL 67
            :|.:.|:.:|  |....|:|   |:.:.:..|:..|::..  ...:::.:.|.||..|.| |.|.
 Worm    24 LYPNGSTKSD--ELVLHDYG---LEEIPMRYHIEQPEEDY--DPQNVKKLDLTHNSFVIL-RGLT 80

  Fly    68 QFGNLKILDLSSNAITTLPDAVCQL-PLVTLIAKNNLLTNASLPKSLLTKMANGNGNGNATGGTN 131
            .|.|:.:||:|.|:::.||:.:..| .|.||||:||||.:  |||.|...               
 Worm    81 TFNNVSVLDVSFNSLSALPEDIGTLSSLTTLIARNNLLEH--LPKGLQLL--------------- 128

  Fly   132 STLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSLHVLSLGGNLISEVPEA 196
            ..|:.|.||||:|.:.|..:..:|.||.|:||||.|.|...:|..:..|.||.||||.:.|:|.:
 Worm   129 ENLEHLYLSGNRLEYVPPVILTMRKLKTLHLGGNYIDSCPSNISVLTLLRVLYLGGNRLREIPAS 193

  Fly   197 VGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVV 261
            :|.|::|:.|.||||::|.:|:::..|..|::|.||.||||.||.||:.|:.|.:||||:||||.
 Worm   194 IGCLDELENLGLCDNILETIPSTLGDLHYLETLSLHNNRLRTLPTDILNLRRLQQLSLRNNPLVH 258

  Fly   262 RFVQDMALKPPTLLELAGRMVKASGQRPGPYD--IPRTLAEYLNSANCCVNPNCKGVFFDNRVEH 324
            .||.:|.|.||:|.||:||.|:.:..:....|  :|..|..||.||..||||.|:||:||.||||
 Worm   259 SFVHNMDLAPPSLKELSGRTVRQNYHKVPNLDEILPSDLVAYLGSACQCVNPECQGVYFDARVEH 323

  Fly   325 IKFVDFCGKYRVPLLQYLCSSKCIEPEQPAARGSSVPAASASSGF--------MMRKVLLG 377
            ||||||||||||||:|:|||.:|         .:.||:....:..        :||:||||
 Worm   324 IKFVDFCGKYRVPLMQFLCSPRC---------SAGVPSVDYDTSSESEEEIEPIMRRVLLG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32687NP_001259412.1 leucine-rich repeat 72..92 CDD:275380 6/19 (32%)
leucine-rich repeat 94..133 CDD:275380 13/38 (34%)
LRR_8 132..190 CDD:290566 26/57 (46%)
LRR_4 134..171 CDD:289563 18/36 (50%)
leucine-rich repeat 134..156 CDD:275380 8/21 (38%)
leucine-rich repeat 157..179 CDD:275380 10/21 (48%)
leucine-rich repeat 180..202 CDD:275380 11/21 (52%)
LRR_8 202..259 CDD:290566 28/56 (50%)
leucine-rich repeat 203..225 CDD:275380 9/21 (43%)
leucine-rich repeat 226..248 CDD:275380 13/21 (62%)
Y42G9A.3NP_001022864.1 leucine-rich repeat 34..62 CDD:275380 6/32 (19%)
leucine-rich repeat 63..84 CDD:275380 8/21 (38%)
LRR_8 84..141 CDD:290566 27/73 (37%)
leucine-rich repeat 85..107 CDD:275380 7/21 (33%)
LRR_RI 94..>275 CDD:238064 85/197 (43%)
leucine-rich repeat 108..130 CDD:275380 13/38 (34%)
LRR_8 130..187 CDD:290566 26/56 (46%)
leucine-rich repeat 131..153 CDD:275380 8/21 (38%)
leucine-rich repeat 154..176 CDD:275380 10/21 (48%)
leucine-rich repeat 177..199 CDD:275380 11/21 (52%)
LRR_8 199..256 CDD:290566 28/56 (50%)
leucine-rich repeat 200..222 CDD:275380 9/21 (43%)
leucine-rich repeat 223..245 CDD:275380 13/21 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159141
Domainoid 1 1.000 108 1.000 Domainoid score I4028
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14598
Inparanoid 1 1.050 253 1.000 Inparanoid score I1970
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52401
OrthoDB 1 1.010 - - D382000at33208
OrthoFinder 1 1.000 - - FOG0005500
OrthoInspector 1 1.000 - - oto17751
orthoMCL 1 0.900 - - OOG6_106090
Panther 1 1.100 - - LDO PTHR45752
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4305
SonicParanoid 1 1.000 - - X3919
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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