DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32687 and LRRC58

DIOPT Version :9

Sequence 1:NP_001259412.1 Gene:CG32687 / 31980 FlyBaseID:FBgn0052687 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001093148.1 Gene:LRRC58 / 116064 HGNCID:26968 Length:371 Species:Homo sapiens


Alignment Length:375 Identity:170/375 - (45%)
Similarity:225/375 - (60%) Gaps:35/375 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LDFGRMSLDLVTLEDHLAS-------PQKALLKSSGDIETMLLNHNRLVGLPRLL-LQFGNLKIL 75
            |::.|:|:...|||..|.:       .::|||:       :||.|||||.|||.| ..|.:|::|
Human    16 LNWSRLSVSTETLESELEARGEERRGAREALLR-------LLLPHNRLVSLPRALGSGFPHLQLL 73

  Fly    76 DLSSNAITTL-PDAVCQLPLVTLIAKNNLLTNAS-LPKSLLTKMANGNGNGNATGGTNSTLKELN 138
            |:|.||:|.| |:.:....|.||:||||.|...| |||.|            |......:|:.||
Human    74 DVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGL------------AQSPLCRSLQVLN 126

  Fly   139 LSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSLHVLSLGGNLISEVPEAVGSLNQL 203
            ||||.....|..:.|||.|:.|.||||::.|:..:|..:|||..|.||||.|.|:|..:|:|..|
Human   127 LSGNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNLPSL 191

  Fly   204 QALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMA 268
            ..||||||.|:.:|..:::|.:|:||.||.|.|.:||::|:.|.:|.|||||.||||||||:|:.
Human   192 NYLVLCDNKIQSIPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLT 256

  Fly   269 LKPPTLLELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGK 333
            ..||||||||.|.:|.......|||:|..|..||.||:.|.||.|.||:||..|..|||||||||
Human   257 YDPPTLLELAARTIKIRNISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGK 321

  Fly   334 YRVPLLQYLCSSKCIEPEQPAARGSSVPAASAS------SGFMMRKVLLG 377
            ||:||:.||||.:|..|...|:..|:..:.|.|      :...|:|||||
Human   322 YRLPLMHYLCSPECSSPCSSASHSSTSQSESDSEDEASVAARRMQKVLLG 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32687NP_001259412.1 leucine-rich repeat 72..92 CDD:275380 9/20 (45%)
leucine-rich repeat 94..133 CDD:275380 14/39 (36%)
LRR_8 132..190 CDD:290566 27/57 (47%)
LRR_4 134..171 CDD:289563 18/36 (50%)
leucine-rich repeat 134..156 CDD:275380 10/21 (48%)
leucine-rich repeat 157..179 CDD:275380 8/21 (38%)
leucine-rich repeat 180..202 CDD:275380 11/21 (52%)
LRR_8 202..259 CDD:290566 28/56 (50%)
leucine-rich repeat 203..225 CDD:275380 10/21 (48%)
leucine-rich repeat 226..248 CDD:275380 11/21 (52%)
LRRC58NP_001093148.1 LRR 1 45..66 14/27 (52%)
LRR_8 53..103 CDD:290566 26/49 (53%)
LRR_RI <59..179 CDD:238064 55/131 (42%)
LRR 2 69..91 9/21 (43%)
leucine-rich repeat 70..92 CDD:275380 9/21 (43%)
LRR 3 92..113 12/20 (60%)
leucine-rich repeat 93..121 CDD:275380 14/39 (36%)
LRR_8 120..176 CDD:290566 25/55 (45%)
LRR 4 121..143 9/21 (43%)
leucine-rich repeat 122..144 CDD:275380 10/21 (48%)
LRR 5 144..166 8/21 (38%)
leucine-rich repeat 145..167 CDD:275380 8/21 (38%)
LRR_8 167..224 CDD:290566 28/56 (50%)
LRR 6 167..189 11/21 (52%)
leucine-rich repeat 168..190 CDD:275380 11/21 (52%)
LRR_4 189..228 CDD:289563 17/38 (45%)
LRR 7 190..211 9/20 (45%)
leucine-rich repeat 191..213 CDD:275380 10/21 (48%)
LRR 8 213..234 10/20 (50%)
leucine-rich repeat 214..236 CDD:275380 11/21 (52%)
LRR 9 236..256 15/19 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..361 4/20 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146932
Domainoid 1 1.000 120 1.000 Domainoid score I5777
eggNOG 1 0.900 - - E33208_3BCFH
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H14598
Inparanoid 1 1.050 277 1.000 Inparanoid score I2959
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52401
OrthoDB 1 1.010 - - D382000at33208
OrthoFinder 1 1.000 - - FOG0005500
OrthoInspector 1 1.000 - - oto89332
orthoMCL 1 0.900 - - OOG6_106090
Panther 1 1.100 - - LDO PTHR45752
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4305
SonicParanoid 1 1.000 - - X3919
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.