DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PPP4R2r and H39E23.3

DIOPT Version :9

Sequence 1:NP_525083.2 Gene:PPP4R2r / 31979 FlyBaseID:FBgn0030208 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001024021.1 Gene:H39E23.3 / 3565355 WormBaseID:WBGene00044201 Length:746 Species:Caenorhabditis elegans


Alignment Length:570 Identity:160/570 - (28%)
Similarity:237/570 - (41%) Gaps:105/570 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 MKSSLLERLDLFNAAPFTVQRLCELLIDPRKQYSRIDKFMRALEKNILVVSTID-----PGRKRT 147
            ||..|...| ||.|...|||..      |.|.       ..|.|...:.:.|.|     |.::..
 Worm     1 MKLFLCSLL-LFAALSVTVQGF------PTKD-------REARETEPVKLPTADSEKKAPTKREA 51

  Fly   148 ESENGDSLDSVVNGDLSMEVN----IDIEMENNNGNADEGSSPGAGSAGCAQKASCPRSDDNDQP 208
            :....:|.||........|.:    ...:.|.|.....|...|...||...:||  |...:.|:|
 Worm    52 DPPKTESADSEKKAPTKRESDKPKTESADSEKNAPAKREADKPKTESADSEKKA--PAKREADKP 114

  Fly   209 KAKKAKLEIDGEERSEA----SDETDTEVATRVKNEKDEKNDNDETDSPHEAAEIEEPDE-EVDE 268
            |.:.|..|.....:.||    ::..|:|.....|.|.| |...:..||...|....|.|: :.:.
 Worm   115 KTESADSEKKAPAKREADKPKTESADSEKKAPAKRESD-KPKTESADSEKNAPAKREADKPKTES 178

  Fly   269 ADQETKTTKQPAYGSQKEGEQEESFPSSADDEAEDPMVSKSIEAEKELVAQEK----KREEDKKV 329
            ||.|.|.   ||   ::|.::.::  .|||.|.:.|...::.:.:.|....||    |||.||  
 Worm   179 ADSEKKA---PA---KREADKPKT--ESADSEKKAPAKREADKPKTESADSEKKAPAKRESDK-- 233

  Fly   330 AIEPKEEIVKKEEVV----ESDKPDGKVAQLGDKAVVKK-----STPPADGENQEPVKVKAENEK 385
               ||.|....|:..    |:|||..:.|....||..|:     .|..||.|.:.|||.:|:..|
 Worm   234 ---PKTESADSEKKAPVKREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPVKREADKPK 295

  Fly   386 EE----KKHAPIKTEKQDDIDSTETDDAPSAEKPAEEKIASSESKPKTKSED-DPEAETKK-SQP 444
            .|    :|.||.|.|.    |..:|:.|.|.:|...::.|   .||||:|.| :.:|.||: :.|
 Worm   296 TESADSEKKAPAKRES----DKPKTESADSEKKAPVKREA---DKPKTESADSEKKAPTKREADP 353

  Fly   445 EKTETEAAEKSVSDEKQAAEPNAESENRNDLTTSK------ATEAAQESVEKSPVE-DASSPAVE 502
            .|||:..:||....:::|.:|..||.:.....::|      .||:| :|.:|:||: :|..|..|
 Worm   354 PKTESADSEKKAPAKREADKPKTESADSEKKASAKREADKPKTESA-DSEKKAPVKREADKPKTE 417

  Fly   503 DLAAATTPQSPLGAADSAAETPPAETGDDSQASPLVAAVTPPVLALNDQPMEDTPAEEEARVSPS 567
              :|.:..::|:   ...|:.|..|:.|..:.:|......||.....|.. :..||:.||  .|.
 Worm   418 --SADSEKKAPV---KREADPPKTESADSEKKAPTKREADPPKTESADSE-KKAPAKREA--DPP 474

  Fly   568 ATVEEVVMAESANAGAMA----------TEEA--AKDDPAAMEIDDTSQE 605
            .|       |||::...|          ||.|  .|..||..|.|....|
 Worm   475 KT-------ESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPP4R2rNP_525083.2 PPP4R2 10..292 CDD:286293 55/217 (25%)
H39E23.3NP_001024021.1 PTZ00121 <41..737 CDD:173412 144/516 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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