DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2887 and Samd13

DIOPT Version :9

Sequence 1:NP_572633.1 Gene:CG2887 / 31978 FlyBaseID:FBgn0030207 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_083420.2 Gene:Samd13 / 75015 MGIID:2686498 Length:234 Species:Mus musculus


Alignment Length:178 Identity:54/178 - (30%)
Similarity:75/178 - (42%) Gaps:44/178 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DYYKILGIQRTANDGEIRKAYHKQALRYHPDKNKSPQ--AEEIFKQVAKAYEVLSDKKKRGSYDS 66
            :|||:||:.|.|:..:|::|:|:.||:.|||||...:  |||.|||||:||.:|||.|||..|| 
Mouse     3 NYYKVLGVPRNASSSDIKRAFHQLALQVHPDKNPGDKEAAEEKFKQVAEAYHILSDAKKRKDYD- 66

  Fly    67 RNDKGTRRNTANQGSGFGDGTAFGS-----------------CG-----------------GGSG 97
                 ..|...|:|...|||...|.                 |.                 .|..
Mouse    67 -----RSRWNRNKGEIRGDGHDKGETIRVNDSRDETDWEEKICSRRPRHTFQKVTEDEDLFSGDC 126

  Fly    98 SGSGGGSGGGRQNNPRANFGRFFDNSESYSTFFEDIENDFDSDDDVLL 145
            ..||..:|..|.::|........|.  .:|||.......:..|.:..:
Mouse   127 LFSGPITGSRRASSPFFTVTPIMDT--GFSTFVSHESRSYSDDPETFV 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2887NP_572633.1 DnaJ 1..331 CDD:223560 54/178 (30%)
DnaJ 4..65 CDD:278647 33/62 (53%)
DnaJ_C 163..326 CDD:199909
Samd13NP_083420.2 DnaJ 2..>67 CDD:223560 35/69 (51%)
DnaJ 3..66 CDD:278647 33/62 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844326
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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