DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2887 and dnajb4

DIOPT Version :9

Sequence 1:NP_572633.1 Gene:CG2887 / 31978 FlyBaseID:FBgn0030207 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001096404.1 Gene:dnajb4 / 100125006 XenbaseID:XB-GENE-1007708 Length:357 Species:Xenopus tropicalis


Alignment Length:376 Identity:139/376 - (36%)
Similarity:197/376 - (52%) Gaps:74/376 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPKDYYKILGIQRTANDGEIRKAYHKQALRYHPDKNKSPQAEEIFKQVAKAYEVLSDKKKRGSYD 65
            |.||||.:|||::.|::.:|:|||.||||::|||||||..|||.||::|:|||||||.|||..||
 Frog     1 MGKDYYSVLGIEKGASEDDIKKAYRKQALKWHPDKNKSAHAEEKFKEIAEAYEVLSDPKKREVYD 65

  Fly    66 SRNDKGTRRNTANQGSGFGDGTAFGSCGGGSGS--GSGGGSGGGRQNNPRANFGRFFDNSESYST 128
            ...::|.:                    ||||:  |.||........:|.|.|..||..:..:..
 Frog    66 QFGEEGLK--------------------GGSGAPDGHGGNFHYTFHGDPHATFAAFFGGANPFEI 110

  Fly   129 FF----------EDIENDFDSDDDVLLGGGAGAPKRRCE-------QQSPQSSIEHVIYVALEDI 176
            ||          ||:|.|.|...........|.|:.:.:       :|.|  .|.|.:.|:||:|
 Frog   111 FFGRRMPGGRDDEDMELDGDPFSSFTSFNMNGFPREKNQVGNQFRRKQDP--PIIHDLRVSLEEI 173

  Fly   177 ANGCNRRMKISRASGRNGVDGVQY---DRILTVKIPPGCKAGTKICFPNEGIQLPNLEPANVVFI 238
            ..||.:||:|||.  |...||...   |:|||::|..|.|.||||.||.||.:.|...||::||:
 Frog   174 YTGCTKRMRISRK--RLNPDGRSVRTEDKILTIEIKKGWKEGTKITFPREGDEAPMTIPADIVFV 236

  Fly   239 IRDKPHPIFRRDGNNLLYTAEISLKDALCGLHVMVPTLLGRPMELKTDVGEVISPKSVRRILGYG 303
            ::||||..|:|||:|::....:||::||||..:.||||.||.:.:  .:.::|.|...|||:|||
 Frog   237 VKDKPHTHFKRDGSNIVCPVRVSLREALCGCSINVPTLDGRSIPM--TINDIIKPGMRRRIIGYG 299

  Fly   304 LP-----------------------DSI---NNSRRGSIVVRFSIQFPDAI 328
            ||                       .|:   |:....:..:.|.:|..||:
 Frog   300 LPFPKKPRTKWRSACGIRSYFSRQHSSVIKGNSKTTSACFLNFHLQLKDAL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2887NP_572633.1 DnaJ 1..331 CDD:223560 139/376 (37%)
DnaJ 4..65 CDD:278647 38/60 (63%)
DnaJ_C 163..326 CDD:199909 71/191 (37%)
dnajb4NP_001096404.1 DnaJ_bact 4..307 CDD:274090 131/328 (40%)
DnaJ 4..65 CDD:278647 38/60 (63%)
DnaJ_C 160..304 CDD:199909 68/149 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53515
OrthoDB 1 1.010 - - D1393097at2759
OrthoFinder 1 1.000 - - FOG0000274
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X227
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.