Sequence 1: | NP_001245614.1 | Gene: | nocte / 31976 | FlyBaseID: | FBgn0261710 | Length: | 2309 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006234067.1 | Gene: | Prrc2b / 296637 | RGDID: | 1595906 | Length: | 2240 | Species: | Rattus norvegicus |
Alignment Length: | 2761 | Identity: | 544/2761 - (19%) |
---|---|---|---|
Similarity: | 827/2761 - (29%) | Gaps: | 1053/2761 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LGGSRGERNAKPKFTALDINRMYKNSRGESSEPSAQKNQVPRKHGMQILGKVPSARR--PPANLP 66
Fly 67 SLKAETHTSSNNNLLVSVEGATSGGAGAGGAAGSGAAGTNTSHNNTTAHSGSSGTSGGAGSGGGG 131
Fly 132 TASSSAGGHLSQQLTHSQHQHNNNVALGPNAGKFVNSNNGSSNNNAGSSGSGNKNFKLINNSVGS 196
Fly 197 SGGGGQGGSGGGGSSGVGGGSGSGSGGHSVNSPKTWSAIT---TGHERGSGGQNYGRQQQQVVPH 258
Fly 259 YQSPQFQYEFPTLDGTVGSGAGGGSGAGVGSGSGAGKSHYQNQVHHAGHQNHHQHQQHHQQHQQH 323
Fly 324 HHQQQQHHRDYHHGHGRQYGHHSHRDYRDGSDDVGGGSADLGELSLRPQNDTAAWLQQQEKAAKV 388
Fly 389 AAAAAADQGLNLQGPGHHQMGGNGGAGGGSGGAVPLPILSLMPSFMRSGAPMPASGATAASILAG 453
Fly 454 GSLDTSALPNAPYQNGILGARSASPAVVGSGSFRAATAIPKRPPT------------SSSPPQSG 506
Fly 507 LGIGGSPTP--------PQSQQQANGGAGGAGRKDKDYVVEPEVAQMQRP------------IIR 551
Fly 552 EEDLERLNAI--AKDDSWT-KQDDIDFTKKLAFSDDESTPEE---HQGQGKQHS----SAQLQAQ 606
Fly 607 GSSSSTDQRKL--------------------------SASTTSWQRGKESTDRDQPSEGIQDQQQ 645
Fly 646 QLQQQQQQQEVRQQNGHRGSSGNVGAPVAGGIALDASVYERVKQRKEEEERREMERKQAA-AKKL 709
Fly 710 QELEMKMNSKKAAAAALAGAEGGVSSASVPLSNEVPPTSAPLGNASEDEGGGQGGGGG------- 767
Fly 768 -----LNRRPRGSISSLGSGVTPTGGAGGGGGGVSSSS-----SAGGDYGQKNFLTHFQSNLPPR 822
Fly 823 FQRQQQQQQQQLPRLEKSASASSAFDSNSRY---------------------------------- 853
Fly 854 -----------------------LQKGGV--------SGGGGGVSG------------------- 868
Fly 869 -------GAQANAGQGRSIS----------GGYVQRG----ASVGGSSGYGRNRH---------- 902
Fly 903 ---------DSSSAREDQDLDQQRFTRGQDYRQAQALPRSISENSHRKTSVSSAGDDVLGG---- 954
Fly 955 SCSSWAEQTDAEQKVHHRHREESFSSSHSHDSAVQIKILQRPARQPSL-----SEESSTQQKQLP 1014
Fly 1015 ----------ASPQQQ----KTLTTDPMPTQILRR-SVDIDKSGDER-----AEDKSALESDDKA 1059
Fly 1060 KSAGKVEEDKSGNKRVSPRSGA---ACGGRGGRGYAGSSGGSSVGSGSSY--RGQRNASDWGSSR 1119
Fly 1120 GSGGAGGRRYYGSGGEQSEHSEDVDEECYSSGGGGAARRSPKESGNGAPNSGASANKAGFSPRGE 1184
Fly 1185 PSRR--GRGGLSSGGGASASCYRRQPVGTGSAGGSG--SGGSGRSYGRLGYEEY--------GKQ 1237
Fly 1238 QRTSESETDLDKTKQNQLALSAGLHKPSKDDKDLP----ALGGE--------EKDKTAALAPAHN 1290
Fly 1291 TALLAKDELQKDAAGRLP------LPPGLA--------------------APGSA---------V 1320
Fly 1321 GSVTATSSSVVVPG----------------------------AADKKKIESCAVVGGEKVTGSKL 1357
Fly 1358 PAI----GEKTSLGAVGSGPSTSLLL------------DAGAPVN----TIIFENST-------- 1394
Fly 1395 -------------YKQQAAAASVVTKPGTLSVSSSGATMTVDSLSSALSQMSFGGKATAAGSGDD 1446
Fly 1447 SQDMKL--GFSFGDDPTTPLKVVDNIDKTASQQQQQQQQQHSQQQQQQQQQQNNSTADLNMKIAS 1509
Fly 1510 VKKVWESATPMSDGP-SPAQVQQ------QQQQQPQQQQQSQVQVAAQQQQQQVVGPQQ------ 1561
Fly 1562 ----------AGDDGS-GHMSAASFVAAVAASQHQQQHQQMPHYAVSAVHMQSHHHQQQQQQQQA 1615
Fly 1616 AVAAAQAQHHQQQQAQAHHQHHA------LSSPG---------------PVPGSHGHGYSHG--- 1656
Fly 1657 -SPFDAGSLEQQFQQE------DYPSPQQQQQAHQKTKQ-----LQQQQHLGMSPPPSQQQQQQH 1709
Fly 1710 SQQ-QQQAQHQQQQQQAHQQQQQQQQP-----SFYQASPQFGVGGIPTIPSPP---AVVYNSSQM 1765
Fly 1766 P-PPSQGGNLYAPFHSLDHSSRSPAYSAAAAAHSYP--NPYAAAAAAAAAAAAGGGPFNVNVNAY 1827
Fly 1828 AMQTPHGGSLPPTAPTPDMYSNLSSQFRLGGGPGPGPGPFGQPSSQQLSNPSNHAAVAIISSSSN 1892
Fly 1893 SMMSSGAAKPPQSQQTIGAIGSKSAGSGGGPGPGPGPYATTQTYMNLYAAPPPQHPGQGGPPPGA 1957
Fly 1958 HQLQSNSFYSNSAPGGPSGPQFYGGPPPQGNGGAQSYGLATAAGMYG-------------GHQGG 2009
Fly 2010 PPGSNGPPGPPQSQHTMGTFNTPFMNSQL-----LTAASINQYRGG------------------- 2050
Fly 2051 -PTPGAAY--LKGNQ--------------GQTHMQDSMGRQLKSPL----SADMSLGLAKQVQSQ 2094
Fly 2095 PS------------PPHHKNYGAWDLQNQVLQQQQQQSQQQ------QQQQQRQVGGGNGPSMNA 2141
Fly 2142 LGGRGSGAVGSGSGNGGGGGGGAGGSQVGGNGGGNGVGSVGQSGGGGQGRYPTPIQRPNNYPQHP 2206
Fly 2207 QQQQQQQQQQQQQREQAAAAAVAAQRAQNMR 2237 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nocte | NP_001245614.1 | BAT2_N | 1..155 | CDD:284431 | 44/152 (29%) |
Prrc2b | XP_006234067.1 | BAT2_N | 1..189 | CDD:399768 | 73/290 (25%) |
PHA03247 | <1917..2185 | CDD:223021 | 75/318 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 155 | 1.000 | Domainoid score | I4137 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 163 | 1.000 | Inparanoid score | I4106 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001844 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.050 |