DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nocte and Prrc2c

DIOPT Version :10

Sequence 1:NP_572631.3 Gene:nocte / 31976 FlyBaseID:FBgn0261710 Length:2309 Species:Drosophila melanogaster
Sequence 2:XP_006496829.1 Gene:Prrc2c / 226562 MGIID:1913754 Length:2851 Species:Mus musculus


Alignment Length:2836 Identity:529/2836 - (18%)
Similarity:814/2836 - (28%) Gaps:1129/2836 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLGGSRGERNAKPKFTALDINRMYKNSRGESSEPSAQKNQVPRKHGMQILGKVPSARR--PPA 63
            ||...|...:.....|:..|.:...||   |:|.|  .||..|..:||:|.||||..:||  |||
Mouse     1 MSEKSGQSTKAKDGKKYATLSLFNTYK---GKSLE--TQKTTVAARHGLQSLGKVGISRRMPPPA 60

  Fly    64 NLPSLKAETHTSSNNNLLVSVEGATSGGAGAGGAAGSGAAGTNTSHNNTTAHSGSSGTSGGAGSG 128
            ||||||||...:..|..:|..:|.                                         
Mouse    61 NLPSLKAENKGNDPNVNIVPKDGT----------------------------------------- 84

  Fly   129 GGGTASSSAGGHLSQQLTHSQHQHNNNVALGPNAGKFVNSNNGSSNNNAGSSGSGNKNFKLINNS 193
                      |..|:|   .||:......:.|...|                             
Mouse    85 ----------GWASKQ---EQHEEEKAPEVSPAQPK----------------------------- 107

  Fly   194 VGSSGGGGQGGSGGGGSSGVGGGSGSGSGGHSVNSPKTWSAITTGHERGSGGQNYGRQQQQVVPH 258
                                   .|..:......:||:|::      ...|||..|.|       
Mouse   108 -----------------------PGVAAPPEVAPAPKSWAS------NKQGGQGDGIQ------- 136

  Fly   259 YQSPQFQYEFPTLDGTVGSGAGGGSGAGVGSGSGAGKSHYQNQVHHAGHQNHHQHQQHHQQHQQH 323
             .:.|||.|||:|..                               ||.|               
Mouse   137 -VNSQFQQEFPSLQA-------------------------------AGDQ--------------- 154

  Fly   324 HHQQQQHHRDYHHGHGRQYGHHSHRDYRDGSDDVGGGSADLGELSLRPQNDTAAWLQQQE--KAA 386
             .::::...|.::|.|......:...:|||....|..|:|..|..|.....||...:|.:  |..
Mouse   155 -EKKEKEANDENYGPGPSLRPPNVACWRDGGKSAGSPSSDQDEKQLGQDESTAITSEQNDILKVV 218

  Fly   387 KVAAAAAADQG-LNLQGPGHHQMGGNGGAGGGSGGAVPLPILSLMPSFMRSGAPMPASGATAASI 450
            :...|....|. ||.|.|                 |:.....::||.:|....|           
Mouse   219 EKRIACGPPQAKLNGQQP-----------------ALASQYRAMMPPYMFQQYP----------- 255

  Fly   451 LAGGSLDTSALPNAPYQNGILGARSASPAVVGSGSFRAATAIPKRPPTSSSPPQSGLGIGGSPTP 515
                                   |.|.|.:.|...|         ||:.|...:|..|.|    |
Mouse   256 -----------------------RMAYPPLHGPMRF---------PPSLSEANKSLRGRG----P 284

  Fly   516 PQSQQQANGGAGGAGRKDKDYVVEPEVAQMQRPII------REED-LERLNAIAKDDSWT-KQDD 572
            |.|                 :..|||     ||.|      :|.| .:.|:|.| |:.|. .|.:
Mouse   285 PPS-----------------WASEPE-----RPSILSASELKELDKFDNLDAEA-DEGWAGAQME 326

  Fly   573 IDFTKKLAFSDDESTPEEHQGQGKQHSSAQLQAQGSSSSTDQRK---LSASTTS----------- 623
            :|:|::|.||||    :|......:.||::.|...:..||:.||   .::||.|           
Mouse   327 VDYTEQLNFSDD----DEQGSTSPKESSSEDQTAKTPESTENRKEVDEASSTKSSSQIPAQPPVT 387

  Fly   624 ---WQRGKESTDRDQPSEGIQDQQQQLQQQQQQQEVRQQNGHRG--------------------S 665
               :.:|........||..:....:.|.||......||..|.:|                    .
Mouse   388 KSPYGKGPPFNQERGPSSHLPPPPKLLAQQHPPPPDRQIPGRQGPFPSKPPVPDNDEIWKQRRKQ 452

  Fly   666 SGNVGAPVAGGIALDASVYERVKQRKEEEERR-EMERKQAAAKKLQELEMKM------------- 716
            ...:.|.|           ||.::|:|||||| |.:||.|.|:||::|:.|:             
Mouse   453 QSEISAAV-----------ERARKRREEEERRMEEQRKAACAEKLKQLDEKLGIIEKQPSPEELR 506

  Fly   717 -------------------------------------------NSKKAAAAALAGAEGGVSSASV 738
                                                       ..|:.....|...|........
Mouse   507 EREREKERERELEKEKERELEKEQEKQREMERARQQEKELEQQREKEQELQRLREQEKEGEPKEQ 571

  Fly   739 PLSNEVPPTSAPLGNASEDEGGGQGGGGGLNRRPRGSISSLGSG-----VTPTGGAGGGGGGVSS 798
            ....:|.|....:..|:|:    |.......:......:...|.     .|..         |..
Mouse   572 EKEEKVEPQEPVVEPATEN----QESENNCKKEEEPIFTRQDSNRSEKETTQV---------VQE 623

  Fly   799 SSSAGGDYGQKNFLTHFQSNLPPRFQR-----------QQQQQQQQ--LPRLEKSAS-------- 842
            :....|...:..:...||.:|||||||           ||||||||  ||:...|..        
Mouse   624 AEPESGAQPRPGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQQQGVLPQTVPSQPSNGSVPPP 688

  Fly   843 ----------------ASSAFDSN----SRYLQKGGVSGGGG----GVSGGA----------QAN 873
                            ||..||..    ..|:....:||...    .:..|.          |..
Mouse   689 PHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLIRRDQME 753

  Fly   874 AGQGRSISGGYVQRGA-----------SVGGSSGY---------GRNRHDSSSAREDQDLDQQRF 918
            .....|.|..::.|.|           .:.||..|         .::..::..||.:..:|.:..
Mouse   754 GSPNSSESFEHIARSARDHGISLSEPRMMWGSDPYHAEPQQAATPKSAEETGDARPETAMDHEHM 818

  Fly   919 TRGQDYRQAQA--------------------LPRSISE--NSHRKTSVSSAGDDVLGGSC--SSW 959
            |.......:|.                    |.||:.:  ..|..|:..||..||:....  :|.
Mouse   819 TAAYPVEHSQLETHSKTDVARDSTETEEQKFLSRSLEDVKPRHVDTNTQSACFDVIDQKSLPTSA 883

  Fly   960 AEQTDAEQKVHHRHREESFSSSHS-------HDSAVQI-KILQR--------------------- 995
            .|:..|.:....|.|..|..|:|:       ::.:|.| |::.|                     
Mouse   884 EERISALESQPARKRSVSHGSNHAQNAEEQRNEPSVSIPKVINRCMDSKETVEKPEEKPRKDGFL 948

  Fly   996 -----------------------------------------PARQPSLSE--ESSTQQKQ----- 1012
                                                     |.::|.|.:  |...|:|:     
Mouse   949 RSSEGPKPEKVYKSKSETRWGPRPSSNRREEGNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGEK 1013

  Fly  1013 --------------------------LPASPQQQKTLTTDPMPTQILRRSVDIDKSGDERAEDKS 1051
                                      .||.||.|..::....|......|.:......:.::|:.
Mouse  1014 LEKVTEKVVKAEKPEKKDLPLPLPPPAPAQPQPQPLVSPPVQPEPEKPPSTETSTLTQKPSQDEK 1078

  Fly  1052 ALES-------------DDKAKSAGKVEEDKS---------GNKRVSPRSGAACGGRGG------ 1088
            .||.             :.::.:|..|:|:|.         |.:|..|.|..|......      
Mouse  1079 PLEPVGSVQVEPVVKTVNQQSVAAPTVKEEKPPEKVINKDVGIERSRPDSRLAVKKDSSLPTRTY 1143

  Fly  1089 ------------RGYAGSSGGSSVGSGSSYRGQRNASDWGSSRGSGGAGGRRYY----------- 1130
                        :||.|...|.....|.||||     .:| .||.||.|..|.|           
Mouse  1144 WKEARDRDWFPDQGYRGRGRGEYYSRGRSYRG-----SYG-GRGRGGRGHTREYPQYRDNKPRTE 1202

  Fly  1131 --GSGG-EQSEHSE----------------------DVDEECYSSGG-------GGAARRS--PK 1161
              .||. .|.|.||                      |.|.|.:.|..       |...:|.  |:
Mouse  1203 HVPSGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSVSKGKLPKREERPE 1267

  Fly  1162 ESGNGAPNSG---------------------ASANKAGFSPRGEPSRRGRGGLSSGGGASASCYR 1205
            ......|.|.                     ...:|.||.|:|||:||||||....||       
Mouse  1268 NKKPVKPQSSFKPENHVRIDNRPLEKPYIREEDKSKPGFLPKGEPTRRGRGGTFRRGG------- 1325

  Fly  1206 RQPVGTGSAGGSGSGGSGRSYGRLGYEEYGKQQRTSESETDLDKTKQNQLALSAGLHKPSKDDKD 1270
            |.|.|..|...        :..|..|.:  .|..|.::|                  .|..:|  
Mouse  1326 RDPGGRPSRPA--------TLRRPAYRD--NQWNTRQAE------------------PPKPED-- 1360

  Fly  1271 LPALGGEEKDKTAALAPAHNTALLAKDELQKDAAGRLP------LPPGLAAPGSAVGSVTATSSS 1329
                 ||...:.....|........|.|.:.|.|...|      .||....|             
Mouse  1361 -----GEPPRRHEQFMPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKP------------- 1407

  Fly  1330 VVVPGAADKKKIESCAVVGGEKVTGSKLPAIGEKTSLGAVGSGPSTSLLLDAGAPVNTIIFENST 1394
               |.....::.|:.:                 |||          .:|:.:....|.::.|   
Mouse  1408 ---PRFRRLREREAAS-----------------KTS----------EVLVPSNGTANNVVQE--- 1439

  Fly  1395 YKQQAAAASVVTKPGTLSVSSSGATMTVDSLSSALSQMSFGGKATAAGSGDDSQDMKLGFSFGDD 1459
                     .|..|..:|                      |.|                      
Mouse  1440 ---------PVNPPADIS----------------------GNK---------------------- 1451

  Fly  1460 PTTPLKVVDNIDKTASQQQQQQQQQHSQQQQQQQQQQNNSTADLNMKIASVKKVWESATP----- 1519
              ||    |..::.:|.|..::.:..|:.....::::.:...:.:....:|.|..||..|     
Mouse  1452 --TP----DLSNQNSSDQANEEWETASESSDFNERRERDEKKNADKSSQAVVKAGESVLPPKREI 1510

  Fly  1520 -----MSDGPSPAQVQQQQQQQPQQQQQSQVQVAAQQQQQQVVGPQQAGDDGSGHMSAASFVAAV 1579
                 .|..|.   |.:|.::......:|....:..:.:::...|.:.|..|.....|:....|.
Mouse  1511 AKRSFSSQRPG---VDRQNRRGNNGPPKSGRNFSGPRNERRNGPPSKGGKRGPFDDQASGTAGAD 1572

  Fly  1580 AASQHQQQHQQ-MPHYAVSAVHMQSHHHQQQQQQQQAAVAAAQAQHHQQQQAQAHHQHHALSSPG 1643
            ..|.:...||: :|:.|               .|:.:..||.:.:..              :.||
Mouse  1573 PVSGNSAHHQEGVPNGA---------------GQKNSKDAAGKKRED--------------TKPG 1608

  Fly  1644 PVPGSHGHGYSHGSPFDAGSLEQQFQQEDYPSPQQQQQAHQKTKQLQQQQHL---GMSPPPSQQQ 1705
            |           ..|.:......||...:|.|........:.|.....|.:|   |.:...|::|
Mouse  1609 P-----------KKPKEKVDALSQFDLNNYASVVIIDDHPEVTVIEDPQSNLNDDGFTEVVSKKQ 1662

  Fly  1706 QQQHSQQQQQAQHQQQQQ--------QAHQQQQQQQQPSFYQASPQFGVGGIPTIPSPPAVVYNS 1762
            |::...::::.:.:|..|        :..:.|..:..|.|  |..|  ..|...|.:||     |
Mouse  1663 QKRLQDEERRKKEEQVVQVWSKKNIGEKGRSQTSKLPPRF--AKKQ--ATGTQQIQAPP-----S 1718

  Fly  1763 SQMPPPSQGGNLYAPFHSLDHSSRSPAYSAAAAAHSYPNPYAAAAAAAAAAAAGGGPFNVNVNAY 1827
            :.:|..|....|.||              ||||..|.|.|....|:|.|.... ..|..|..:..
Mouse  1719 APVPVSSSAPGLTAP--------------AAAAPASTPAPVPILASATALVPV-STPAPVLTSCP 1768

  Fly  1828 AMQTPHGGSLP-PTAPTPDMYSNLSSQFRLGGGPG-PGPGPFGQPSSQQLSNPSNHAAVAIISSS 1890
            | ..|...|.| |.:.:..:.::.|||      |. |.|.|.       |::.|...:|.|::|:
Mouse  1769 A-PVPTSASAPVPASTSSPVTASSSSQ------PSVPAPTPV-------LASASTTVSVPILTSA 1819

  Fly  1891 SNSMMSSGAAKPPQSQQT--IGAIGSKSAGSGGGPGPG----------------PGPYAT----- 1932
            |..:::|..|....|..|  :.|....|..:...|...                |.|.:|     
Mouse  1820 SIPILASALAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVPPPASTVQTQT 1884

  Fly  1933 -TQTYMNLYAAPPPQHPGQGGPPPGAHQLQS--NSFYSNSAPGGPSGPQFYGGPPPQGNGGAQSY 1994
             |||:..:.:..||..|....|||.. :|.|  .|..::....|.|.|.            :||:
Mouse  1885 QTQTHKPVQSPLPPSAPSSKQPPPSI-RLPSAQTSNGTDFVAAGKSMPT------------SQSH 1936

  Fly  1995 GLATAAGMYGGHQGGPPGSN------GPPGPPQSQHTMGTFNTPFMNSQLLTAASINQYRGGPTP 2053
            |..||. ::......|...|      ||..|||.. ::..:|.|.  :...:|.|....|.|...
Mouse  1937 GSLTAE-LWDSKVAAPAVLNDISKKLGPISPPQPP-SVSAWNKPL--TSFGSATSSEGTRNGQES 1997

  Fly  2054 -----------GAAYLKGNQGQT----------HMQDSMGRQLKSPLSADM------SLGLAKQV 2091
                       ||....||:.:.          .:.:...::.|.|.:..:      .|.|.:..
Mouse  1998 GVEIGIDTIQFGAPASNGNENEVVPVLSEKATDKVPEPKEQRQKQPRAGPIKAQKLPDLSLVENK 2062

  Fly  2092 QSQPSPPHHKNYGAWDLQNQVLQQQQQQSQQQQQQQQRQVGGGNGPSMNALGGRGSGAVGSGSGN 2156
            :.:|.|...:.    .|:|:.::..||...:.|::....|.....|..    .:.:.||...|  
Mouse  2063 EHKPGPIGKER----SLKNRKVKDAQQVEPEGQEKPSPAVVRSTDPET----AKETKAVSEMS-- 2117

  Fly  2157 GGGGGGGAGGSQVGGNGGGNGVGSVGQSGGGGQGR-----YPTP--------------------- 2195
                      :::|      .:.||..:..|...:     |.||                     
Mouse  2118 ----------AEIG------AMISVSSAEYGSDAKESVTDYTTPSSSLPNTVATNNAKMEDTLVN 2166

  Fly  2196 -IQRPNNYPQHPQQQQQQQQQQQQQ--------REQAAAAAVAAQRAQNMRQ----VTGAG---- 2243
             :..||..|. |:::..||......        ..:..:|..|.:.:.|:|:    ||...    
Mouse  2167 NVPLPNTLPL-PKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNLREKGSPVTSTAPPIV 2230

  Fly  2244 GGVAGSAGGGGS------------QTPVGPAGGNGGPGGAG 2272
            .||:.||.|..:            |.||..........|||
Mouse  2231 SGVSSSASGPSTANYSSFSSASMPQIPVASVTPTASLSGAG 2271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nocteNP_572631.3 BAT2_N 1..163 CDD:462063 42/163 (26%)
Prrc2cXP_006496829.1 BAT2_N 2..162 CDD:462063 61/331 (18%)
PHA03247 <1707..1979 CDD:223021 78/320 (24%)

Return to query results.
Submit another query.