DRSC/TRiP Functional Genomics Resources

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Protein Alignment nocte and prrc2b

DIOPT Version :9

Sequence 1:NP_001245614.1 Gene:nocte / 31976 FlyBaseID:FBgn0261710 Length:2309 Species:Drosophila melanogaster
Sequence 2:XP_031746766.1 Gene:prrc2b / 100492119 XenbaseID:XB-GENE-5956342 Length:2175 Species:Xenopus tropicalis


Alignment Length:2681 Identity:531/2681 - (19%)
Similarity:822/2681 - (30%) Gaps:1074/2681 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LGGSRGERNAKPKFTALDINRMYKNSRGESSEPSAQKNQVPRKHGMQILGKVPSARR--PPANLP 66
            ||.....::.|.|:::|::...||   |:|.| :.:...:|| ||:|.||||.:|||  ||||||
 Frog     5 LGQITKGKDGKSKYSSLNLFDKYK---GKSIE-AVRTTVIPR-HGLQSLGKVAAARRMPPPANLP 64

  Fly    67 SLKAETHTSSNNNLLVSVEGATSGGAGAGGAAGSGAAGTNTSHNNTTAHSGSSGTSGGAGSGGGG 131
            |||:|...:..|..:|..:|.                                            
 Frog    65 SLKSENKGNDPNIFIVPKDGT-------------------------------------------- 85

  Fly   132 TASSSAGGHLSQQLTHSQHQHNNNVALGPNAGKF--VNSNNGSSNNNAGSSGSGNKNFKLINNSV 194
                   |..::|  ..|.|.:::|...|.....  .......||....:.....:|..|:    
 Frog    86 -------GWANKQ--EQQDQKSSSVTAPPQQESLPPQGLQKSVSNLQKPTPSINQENINLV---- 137

  Fly   195 GSSGGGGQGGSGGGGSSGVGGGSGSGSGGHSVNSPKTWSAIT---TGHERGSGGQNYGRQQQQVV 256
                                      .||     ||:|:.:.   .|.|.||.|.|      :::
 Frog   138 --------------------------PGG-----PKSWAQLNGKPAGQEGGSRGSN------RLL 165

  Fly   257 PHYQSPQFQYEFPTLDGTVGSGAGGGSGAGVGSGSGAGKSHYQNQVHHAGHQNHHQHQQHHQQHQ 321
            ..  ||:   |||||             ...|....|||                          
 Frog   166 SF--SPE---EFPTL-------------KAAGEQDKAGK-------------------------- 186

  Fly   322 QHHHQQQQHHRDYHHGHGRQYGHHSHRDYRDGSDDVGGGSADLGELSLRPQN-------DTAAWL 379
                  ::...|..:|.|.                           |||||:       |..:|.
 Frog   187 ------EKSVLDPSYGPGP---------------------------SLRPQSKPLALLPDVTSWR 218

  Fly   380 QQQEKAAKVAAAAAADQGLNLQGPGHHQMGGNGGAGGGSGGAVPL-PILSLMPSFMRSGAPMPAS 443
            .                                  |||...|..| |..|  |:...|...:|..
 Frog   219 D----------------------------------GGGRSIASSLSPTAS--PTEPGSKTAVPGE 247

  Fly   444 GATAASILAGGSLDTSALPNAPYQNGILGARSASPAVVGSGSFRAATAIPKRPPT---------- 498
            |..:.|:    :.||..          |..|.|.|...|...|...|   ..|||          
 Frog   248 GPPSTSL----ANDTKE----------LSLRPAQPTRKGPAQFMGNT---YHPPTYHDMLPAFMC 295

  Fly   499 SSSPP----------------QSGLGIGGSPTPPQSQQQANGGAGGAGRKDKDYVVEPEVAQMQR 547
            |..||                ||.|    .|..|..|.|.|   ...||:.:..:..|..|:..|
 Frog   296 SQHPPEPSGTLDRTSFPTLNSQSRL----EPRVPFRQFQMN---DNEGRESRFPIAPPRSARPPR 353

  Fly   548 P---------IIREEDLERLNAIAKD--DSWT-KQDDIDFTKKLAFSDDESTPEEHQGQGKQHSS 600
            |         ||..|||:.|:.:..|  |.|. ..|::|:::||.||:||   ||..|..|...|
 Frog   354 PPAERPPRATIINAEDLKELDDLDNDAEDGWAGLHDEVDYSEKLKFSEDE---EEEDGAAKDGRS 415

  Fly   601 ------AQLQAQGSSSST---------DQRKLSASTTSWQRGKEST------------------D 632
                  .:.|.|.|.:||         |:.|:...|.|..|....|                  |
 Frog   416 KWNGWDGKRQRQVSFNSTDSVEGKHPADEGKVWNDTLSHSRPARRTPEPAPQGPRKPNTWAAVAD 480

  Fly   633 RDQP--------SEGIQDQQQQLQQQQQ--QQEVRQQNGHRGSSGNVGAPVAGGIALDASVYERV 687
            ..:|        ...|:::.::|.|::.  |.|:                        :...||.
 Frog   481 HQKPPAPAAVLRQPSIEEKDEKLPQRKNFVQSEI------------------------SEAVERA 521

  Fly   688 KQRKEEEERREMERKQAA-AKKLQELEMKMNSKKA------AAAALAGAE-----GGVSSASVPL 740
            ::|:||||||..|.:.|| |.||::|:.|  :|:|      ::..|...|     ..||..|.|.
 Frog   522 RKRREEEERRNREERLAACAAKLKQLDQK--NKQALKPSADSSRQLDNKENEDPRSPVSDRSNPQ 584

  Fly   741 SN---------EVPPTSAPLGNASEDEGGGQGGGGGLNRRPRGSISSLGSGVTPTGGAGGGGGGV 796
            .|         :..|:..|     |:|             |.|::                    
 Frog   585 ENAHTFRREYSQESPSEYP-----EEE-------------PSGTL-------------------- 611

  Fly   797 SSSSSAGGDYGQ-----KNFLTHFQSNLPPRFQRQQQQQQQ------------------------ 832
            .:.:|:..:|.:     ::|..| |..:|||||||||||:|                        
 Frog   612 KAETSSEEEYAEPTSPAQDFSKH-QKLIPPRFQRQQQQQEQLYKMQQWQQQQQQAYVASTHSNPP 675

  Fly   833 --------QL---------------PRLEKSASASSAFDSN-------SRYLQKGGVSGGGGGVS 867
                    |:               ||:.:..:....:.|:       ...:|:..:||.|...|
 Frog   676 RTFYSPHPQMLGFDPRWMMMPSYMDPRMTQGRAPVDFYPSSIHPPGVMKHMIQQDSMSGSGSCHS 740

  Fly   868 G-----------GAQANAGQGRSISGGYV-----------QRGASVGGSSGYGRNRHDSSSARED 910
            .           .|:..:|.|:.   .||           |:.|.......|.||....|||||.
 Frog   741 DEQNCQSERRPQSAEPMSGWGQE---SYVQLHSKACSLPQQKQAETAAVGSYSRNESSYSSAREK 802

  Fly   911 QD-------------------------------LDQQRFTRGQD--------------YRQAQAL 930
            .|                               :..||  ||||              .|..|..
 Frog   803 SDGSPTHPEPLEREEEYLSVSYEKKSTGSFSSCISPQR--RGQDALYQHLESGIESGVNRGRQMA 865

  Fly   931 PRSISENS-------------------HRKTS--VSSAGDDVLGGSCSSWAEQTDAEQKVHHRHR 974
            .|..|...                   |:|:|  .|.|.:|:         .:.|...::.|..:
 Frog   866 ARDSSSRGSEFIKTDKKPQFNGWGYAPHQKSSETASRAEEDL---------SKEDLSDELEHWKK 921

  Fly   975 EESFSS------------SHSHDSAVQIKILQR-----PARQPSLS---------EESSTQQKQL 1013
            |:..||            |.:.:|..|.:.|.|     |.::|.|.         |::..:.|: 
 Frog   922 EDGGSSQDGTGETCWRSESANSNSQQQSEHLGRSRRSGPIKKPVLKALKIEDKELEKNKAEIKE- 985

  Fly  1014 PASPQQQKTL------------TTDPMPTQILRRS-------VDIDKSGDERAE--------DKS 1051
            |..|.::|.|            .:.|.|:.|..::       .:.||...|:||        .:|
 Frog   986 PVKPFKEKILPKTECVVKTEPVVSSPPPSMIEVKTPPPPSPVQETDKFPQEKAERSWETKPLRES 1050

  Fly  1052 ALESDDKAKSAGKVEEDKSGNKRVSPRSGAACGGRG-------GRGYAGSSGGSSVGSGSSYRGQ 1109
            :..|..|......::|:::...|...|.    .|||       .||.:|:..|..|..|   ||.
 Frog  1051 SSTSLQKRSDWIFIDEEQAFGGRTQGRG----RGRGFKDFGFRNRGVSGTYSGQKVSRG---RGV 1108

  Fly  1110 RNASDWGSSRGSGGAGGRRY----YGSGGEQSEHSEDVDEECYSSGGGGAAR-RSPKESGNGAPN 1169
            |..:.....||.  |..||.    :..|.|..|..:...:....:|...|.: |..::...|...
 Frog  1109 REYNPPEDLRGK--ASRRRIASETHSEGSEYEELPKRRRQRGTENGNDPAVQEREAEDLRKGDFQ 1171

  Fly  1170 SGASANKAGFSPRGEPSRRGRGGLSSGGGAS---ASCYRRQPVGT-------GSAGGSG---SGG 1221
            ....:|:.....:.....:.|...:.|....   ::.|.|:|:.|       ..:|||.   .|.
 Frog  1172 DSWRSNRNYSDDQNNTDSKSRAPRAFGRSLPPRLSNSYGRRPLSTKESSHWQAKSGGSSWQEYGA 1236

  Fly  1222 SGRSYG--------------------RLGYEE-YGKQQRT--SESETDLDKTKQNQLALSAGLHK 1263
            ...:||                    ..|::| :|.::|:  .|..:|.|..::.    |.|..:
 Frog  1237 PAEAYGSRHHADRDYAHDYRYADSFPSRGFDESHGDERRSFFQEEYSDRDSLEKR----SFGRRR 1297

  Fly  1264 PSKDDK---------DLPALG---GEE-------------------KDKTAAL---APA---HNT 1291
            |.:.||         :...||   |||                   .||:..:   :|.   ||:
 Frog  1298 PPRQDKPPRFRRLRQERDPLGQWSGEETVGTGNSSEHWQSRPRVPLNDKSGPVHRRSPEMSHHNS 1362

  Fly  1292 ALLAKD-ELQKDAAGRLPLPPG-LAAPGSAVGSVTATSSSVVVPGAADKKKIESCAVVGGEKVTG 1354
            ..:.:| |...:::......|| :...||..||           |.::|:::       .::...
 Frog  1363 DHVTEDWETASESSDFSEKRPGDMDGDGSQSGS-----------GLSEKREL-------SKRSFS 1409

  Fly  1355 SKLPAIGEKTSLGAVGSGPSTSLLLDAGAPVNTIIFENSTYKQQAAAASVVTKPGTLSVSSSGAT 1419
            |:.|.:..::..                       .|.|.|.:         ||..:|.|||...
 Frog  1410 SQRPLMDRQSRK-----------------------VEPSGYDE---------KPSRVSGSSSRND 1442

  Fly  1420 MTVDS---LSSALSQMSFGGKAT---------------AAG-------------SGDDSQ----- 1448
            ....|   .||..|..|:|.:::               .||             |.|.::     
 Frog  1443 FQKSSGPLKSSRCSDDSYGAESSHHRYAMDRSMHCDSGEAGKKQERDSRTPGLKSSDKNEVIGQF 1507

  Fly  1449 DMKLGFSF-------GDDPTTPLKVVDNIDKTASQQQQQQQQQHSQQQQ----QQQQQQNNSTAD 1502
            |:|.|.|.       ||....|.:|::. |:....|..|...:.|..|.    :..::||...  
 Frog  1508 DLKYGDSMLEEESEVGDIGNKPRRVLEK-DRRKKDQVVQVPAKGSSIQSRIPPRFAKKQNGMC-- 1569

  Fly  1503 LNMKIASVKKVWESATPMSDGPSPAQVQQQQQQQPQQQQQSQVQVAAQQQQQQVVGPQQAGDDGS 1567
            |:....:.|::|||:            .|....||.....|:...:...:.....|.:.:..|..
 Frog  1570 LDQADVTAKEIWESS------------GQGISVQPGTDTWSKPVSSFSTESSSTEGFKGSQGDSG 1622

  Fly  1568 GHMSAASFVAAVAASQHQQQHQQMPHYAVSAVHMQSHHHQQQQQQQQAAVAAAQAQHHQQQQAQA 1632
            ..:||.|..::..:||....:..|....::...:........::|.|     .|::.........
 Frog  1623 IDLSAESRESSATSSQRSSPYGTMKPEEMNGTGVAEPKPDCPKEQGQ-----KQSEKKDSDPGSG 1682

  Fly  1633 HHQHHALSSPGPV---------PGSHGHGYSHGS------------------PFDAGSLEQQFQQ 1670
            .::.|   .|||:         .||.|.....|.                  |.:.|   ...:.
 Frog  1683 LNKEH---KPGPIGNERSLKNRKGSEGTERLEGGVPPVNGVEIHVDSVLPVPPIEFG---VSAKD 1741

  Fly  1671 EDY---PSPQQQQQAHQKTK----------------------QLQQQQHLGMSPPPSQQQQQQHS 1710
            .||   |.....|.|:..||                      .:||...|.||.|.:....:..|
 Frog  1742 ADYALPPGTATVQAANTVTKLQDALASKAGLTQSIPILRRDHHMQQGMSLNMSYPTADLTLKMES 1806

  Fly  1711 QQQ--QQAQHQQQQQQAHQQQQQQQQPSFYQASPQFGV-----GGIPTIPSPPAVVYNSSQMP-- 1766
            .::  :.:....:|..........|.||...||.  ||     ||:...|.|.|.|..|:.||  
 Frog  1807 ARKAWENSPSLPEQNSPAGPGSGIQPPSSVGAST--GVNYSSFGGVSMPPMPVASVAPSASMPGN 1869

  Fly  1767 --PPSQGGNLYAPFHSLDHSSR--------SPAYSAAAAAHSYPNPYAAAAAAAAAAAAGGGPFN 1821
              ||     ||...|...:..|        ...|..||||...|.....:..|.|.....||   
 Frog  1870 HIPP-----LYLDGHVFTNQPRLVQQTIPQQQGYQQAAAAQQIPISLHTSLQAQAQLGLRGG--- 1926

  Fly  1822 VNVNAYAMQTPHGGSLPPTAPTPDMYSNLSSQFRLGGGPGPGPGPFGQPSSQQLSNPSNHAAVAI 1886
                            .|.:.:.::||::.              ||   .||...:||       
 Frog  1927 ----------------LPVSQSQEIYSSMQ--------------PF---RSQVYMHPS------- 1951

  Fly  1887 ISSSSNSMMSSGAA-KPPQSQQTIGAIGSKSAGSGGGPGPGPGPYATTQTYMNLYAAPPPQHPGQ 1950
            :|..|..:::||.. |||.:                 |.||.......:|        .|..|.|
 Frog  1952 LSQPSAMVLTSGTGLKPPYN-----------------PFPGMQTLEMVKT--------QPTSPYQ 1991

  Fly  1951 GGPPPGAHQLQSNSFYSNSA--------------PGGPSGPQFYGGPPPQGNGGAQSYGLATAAG 2001
              |..|:.||...|..:.::              ||  |..|.     |:.:.|.|:..|..:..
 Frog  1992 --PLNGSQQLVYESQLNQASQMMDSQLTQLTMPMPG--SQLQM-----PRYSSGQQTMILPQSIQ 2047

  Fly  2002 MYGGHQGGPPGSNGPPGPPQ------------SQHTMGTFNTPFMNSQLLTAASI-NQYR----- 2048
            :       |.|.|.|.|.|:            ||..|.:|:.......:.||... :.||     
 Frog  2048 L-------PQGQNLPVGAPRRMQPSMLTSRESSQMEMKSFHFTDGKQNMPTAMQAQHSYRPSSAS 2105

  Fly  2049 -GGPTPG---AAYLKGNQGQ-----THMQDSMGRQLKSPLSADMSLGLAKQVQSQPSPPHHKNYG 2104
             .|.:||   :|.|...||.     .|..|.....|:||           :|..|||....|...
 Frog  2106 PSGKSPGPGPSANLGSVQGHYPQQVKHRSDDSKGGLRSP-----------KVPEQPSASPMKPAR 2159

  Fly  2105 AWDLQNQVLQQQQQQS 2120
            ...::.|.::.::.::
 Frog  2160 TGAIKPQAVKVEESKA 2175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nocteNP_001245614.1 BAT2_N 1..155 CDD:284431 39/152 (26%)
prrc2bXP_031746766.1 BAT2_N 1..189 CDD:399768 67/332 (20%)
Med15 1818..>2128 CDD:312941 90/400 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 192 1.000 Inparanoid score I3736
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001844
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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