DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or9a and Or42a

DIOPT Version :10

Sequence 1:NP_511107.1 Gene:Or9a / 31975 FlyBaseID:FBgn0030204 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:423 Identity:86/423 - (20%)
Similarity:153/423 - (36%) Gaps:87/423 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 MGIDLWSPTM---ANDRPW----LTFVTMGPLFLFMV-----PMFLAAHEYITQVSLLSDTLG-- 77
            |.:..|.||:   :.|.|.    .|...:..:||..|     ..|:|   |:    |.|..|.  
  Fly     1 MDLRRWFPTLYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVA---YV----LWSFALNFC 58

  Fly    78 STFASMLTLVKFLL-FCYHRKEF--------VGLIYHIRAILAKEIEVWPDAREIIEVENQSDQM 133
            |||...   :.||. :..|..||        :.:.::..:...|.:.||...:...|..|..|:|
  Fly    59 STFYQP---IGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEM 120

  Fly   134 ----------------LSLTYTRCFGLAGIFA--ALKPFVGIILSSIRGDEIHLELPHNGVYPY- 179
                            :||:....|....::.  |...|:..|...        ..|:...||: 
  Fly   121 DRRITDPGERLQIHRAVSLSNRIFFFFMAVYMVYATNTFLSAIFIG--------RPPYQNYYPFL 177

  Fly   180 ---------DLQVVMFYVPTYLWNVMASYSAVTMALCVDSLLFFFTYNVCAIFKIAKHRMIHL-- 233
                     .||..:.|        .|...|....:|||.....|...:.|...|...|:..|  
  Fly   178 DWRSSTLHLALQAGLEY--------FAMAGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGT 234

  Fly   234 -PAVGGKEELEGLVQVLLLHQKGLQIADHIADKYRPLIFLQFFLSALQICFIGFQVAD--LFPN- 294
             |....:::.|.|||.:..|:..|:..|.:.......||:||.:..|   .:||.:.:  ||.| 
  Fly   235 YPYESQEQKYERLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGL---VLGFTLINIVLFANL 296

  Fly   295 PQSLYFIAFVGSLLIALFIYSKCGENIKSASLDFGNGLYETNWTDFSPPTKRALLIAAMRAQRPC 359
            ..::..::|:.::|:....:......:........:.|:::||.|.....::.|:....:.|:|.
  Fly   297 GSAIAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPI 361

  Fly   360 Q-MKGYFFEASMATFSTIVRSAVSYIMMLRSFN 391
            . |....|..|:.|..::.:.:.|...:::..|
  Fly   362 TFMAMNVFPISVGTNISVTKFSFSVFTLVKQMN 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or9aNP_511107.1 7tm_6 68..381 CDD:251636 71/358 (20%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 60/323 (19%)

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