DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RAB11B

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_004209.2 Gene:RAB11B / 9230 HGNCID:9761 Length:218 Species:Homo sapiens


Alignment Length:194 Identity:70/194 - (36%)
Similarity:115/194 - (59%) Gaps:13/194 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :||||||:::||||||||.||.||:.:.|..:...|:|::...||:::..:.:..|:|||:|.:|
Human     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.||||||....:::|::.|:||:|......:.::|||||||..:.|.|..:
Human    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAA---ESP 194
            :...:|.:..|.|.|.||....||.:.|.::..:||.          :.|:::..|.|   |||
Human   138 EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR----------IVSQKQIADRAAHDESP 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/156 (38%)
RAB11BNP_004209.2 Rab11_like 9..173 CDD:206660 62/163 (38%)
Switch 1. /evidence=ECO:0000305|PubMed:16545962, ECO:0007744|PDB:2F9L, ECO:0007744|PDB:2F9M 36..47 3/10 (30%)
Switch 2. /evidence=ECO:0000305|PubMed:16545962, ECO:0007744|PDB:2F9L, ECO:0007744|PDB:2F9M 67..86 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..218 4/8 (50%)

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