DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and YPT7

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_013713.1 Gene:YPT7 / 855012 SGDID:S000004460 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:193 Identity:61/193 - (31%)
Similarity:102/193 - (52%) Gaps:19/193 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVEL-VSRVMMLQVWDTSGDKRFN 70
            :.||::||||||||:.|:.|:.:|:::::|..|:|.|...:.|.: ..:|..:|||||:|.:||.
Yeast     8 ILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQ 72

  Fly    71 SLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEI----RRMCPDKVTVLLVGNKSDDPNHRQVS 131
            ||..:.||.|...:||||:|::.||:||..|..|.    ....|:....:::|||.|....:::.
Yeast    73 SLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIV 137

  Fly   132 MEQGFNYAHR--GALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAE 192
            .|:......:  |.:.....|||:.:||...|..:|.            |.:...|.:.:|.|
Yeast   138 SEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIAR------------SALQQNQADTEAFE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 56/163 (34%)
YPT7NP_013713.1 Rab7 9..182 CDD:206655 58/184 (32%)

Return to query results.
Submit another query.