DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and TEM1

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_013647.1 Gene:TEM1 / 854938 SGDID:S000004529 Length:245 Species:Saccharomyces cerevisiae


Alignment Length:169 Identity:39/169 - (23%)
Similarity:83/169 - (49%) Gaps:10/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSLM 73
            :|.::||:.|||:.|::::..:.:.::|.:|:|::...|.|.:.|..::..:.|..|.:.|.:::
Yeast    22 QVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGGQREFINML 86

  Fly    74 PSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSD-----DPNHRQVSME 133
            |.....:..|:.::|:|..::..:|..|.::...: .|....:|||.|.|     ||.:::....
Yeast    87 PIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGL-NDSAIPILVGTKYDLLIDLDPEYQEQISR 150

  Fly   134 QGFNYAH--RGALGFEEVSAKSGMNVYDIFSSLAMDIYH 170
            ....||.  ...|.|  .|....:|:..||......|::
Yeast   151 TSMKYAQVMNAPLIF--CSTAKSINIQKIFKIALAKIFN 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 38/162 (23%)
TEM1NP_013647.1 Spg1 21..202 CDD:206701 39/169 (23%)

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