DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and YPT6

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_013363.1 Gene:YPT6 / 850966 SGDID:S000004252 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:189 Identity:71/189 - (37%)
Similarity:112/189 - (59%) Gaps:4/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            :|::.||:.||||:.|:.||..|.|.:.|..|:|||..::::.|..:.:.||:|||:|.:||.||
Yeast    11 YKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSL 75

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVL-LVGNKSDDPNHRQVSMEQGF 136
            :||..|.:...::|||||..|||:.||.|:::::....|:..:| :||||||..:.||:|.|:|.
Yeast    76 IPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGE 140

  Fly   137 NYAH-RGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESP 194
            ..|. .||..|.|.|.|:|.||..:|..:|..:..  ..::..:|:.||.........|
Yeast   141 KKAKLLGAKIFMETSTKAGYNVKALFKKIAKSLPE--FQNSESTPLDSENANSANQNKP 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 66/158 (42%)
YPT6NP_013363.1 Rab6 11..173 CDD:206654 67/161 (42%)

Return to query results.
Submit another query.