DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and SEC4

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_116650.1 Gene:SEC4 / 850543 SGDID:S000001889 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:162 Identity:72/162 - (44%)
Similarity:108/162 - (66%) Gaps:1/162 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|.:.|:|::|||||||||||:||.:|:|...::.|:|||.|.::|::..:.:.||:|||:|.:|
Yeast    17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..:.||.|.||:||||:|..::|.||..|.|.:.....|:..:||||||| |...|.|:.:
Yeast    82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS-DMETRVVTAD 145

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLA 165
            ||...|....:.|.|.|||:..||.:||.:||
Yeast   146 QGEALAKELGIPFIESSAKNDDNVNEIFFTLA 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 69/156 (44%)
SEC4NP_116650.1 Rab8_Rab10_Rab13_like 18..183 CDD:206659 72/161 (45%)

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