DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and YPT1

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_116615.1 Gene:YPT1 / 850505 SGDID:S000001856 Length:206 Species:Saccharomyces cerevisiae


Alignment Length:167 Identity:76/167 - (45%)
Similarity:109/167 - (65%) Gaps:0/167 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGD 66
            |.:|||||:|::|:|||||||||:|||||.:|..|:.|:|:|.|.::|||..:.:.||:|||:|.
Yeast     3 SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67

  Fly    67 KRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVS 131
            :||.::..|.||.:|||::|||:|..:||..:..|::||.|.....|..||||||.|..:.|.|.
Yeast    68 ERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVE 132

  Fly   132 MEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            .:....:|....:.|.|.||....||.|.|.::|..|
Yeast   133 YDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 70/156 (45%)
YPT1NP_116615.1 Rab1_Ypt1 7..172 CDD:206661 74/163 (45%)

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