DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab27b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_445911.1 Gene:Rab27b / 84590 RGDID:620114 Length:218 Species:Rattus norvegicus


Alignment Length:168 Identity:64/168 - (38%)
Similarity:103/168 - (61%) Gaps:17/168 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSR----------VMML 58
            :|||.|:|.||||||||:..|.|::|::|..|::.|:|||.:.:.|...::          .:.|
  Rat     6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFKVHL 70

  Fly    59 QVWDTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIR--RMC--PDKVTVLLVG 119
            |:|||:|.:||.||..:.:|.|.|.||::|:||.:||.|:..||.:::  ..|  ||   ::|:|
  Rat    71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIG 132

  Fly   120 NKSDDPNHRQVSMEQGFNYAHRGALGFEEVSAKSGMNV 157
            ||:|..:.|:|:..|....|.:..:.:.|.||.:|.||
  Rat   133 NKADLLDQREVNERQARELAEKYGIPYFETSAATGQNV 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/164 (37%)
Rab27bNP_445911.1 Rab27A 6..185 CDD:206700 64/168 (38%)
Effector region. /evidence=ECO:0000250 38..46 3/7 (43%)

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